RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 TRAV1-1A0A0B4J248 108 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
RFTN1-211ENST00000495666 K7EN84 100 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
RFTN1-211ENST00000495666 COTL1Q14019 142 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 IQCJQ1A5X6 159 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
RFTN1-211ENST00000495666 NIT2Q9NQR4 276 aa6.92□□□□□ -1.3
RFTN1-211ENST00000495666 F2Z2F3 143 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 AMMECR1LQ6DCA0 310 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 WDR73Q6P4I2 378 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 SLC51BQ86UW2 128 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 OCC1Q8TAD7 63 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 PGLYRP4Q96LB8 373 aa6.91□□□□□ -1.3
RFTN1-211ENST00000495666 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 GATCO43716 136 aaKnown RBP6.9□□□□□ -1.3
RFTN1-211ENST00000495666 CTRLP40313 264 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 KRTAP26-1Q6PEX3 210 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 TCTE3Q8IZS6 198 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 GATD1Q8NB37 220 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 BIN3Q9NQY0 253 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 PRR34Q9NV39 138 aa6.9□□□□□ -1.3
RFTN1-211ENST00000495666 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
RFTN1-211ENST00000495666 Q6ZNX1 250 aa6.89□□□□□ -1.31
RFTN1-211ENST00000495666 AKAP14Q86UN6 197 aa6.89□□□□□ -1.31
RFTN1-211ENST00000495666 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
RFTN1-211ENST00000495666 APCSP02743 223 aa6.88□□□□□ -1.31
RFTN1-211ENST00000495666 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
RFTN1-211ENST00000495666 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
RFTN1-211ENST00000495666 SMIM12Q96EX1 92 aa6.88□□□□□ -1.31
RFTN1-211ENST00000495666 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
RFTN1-211ENST00000495666 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
RFTN1-211ENST00000495666 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
RFTN1-211ENST00000495666 C9orf62Q8N4C0 152 aa6.87□□□□□ -1.31
RFTN1-211ENST00000495666 BORCS7Q96B45 105 aa6.87□□□□□ -1.31
RFTN1-211ENST00000495666 EIF5A2Q9GZV4 153 aaKnown RBP6.87□□□□□ -1.31
RFTN1-211ENST00000495666 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.86□□□□□ -1.31
RFTN1-211ENST00000495666 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 GAS8-AS1O95177 125 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 PMCHP20382 165 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 XCL1P47992 114 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 LINC00526Q96FQ7 95 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 TMEM242Q9NWH2 141 aa6.86□□□□□ -1.31
RFTN1-211ENST00000495666 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
RFTN1-211ENST00000495666 SMKR1H3BMG3 65 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 NCR2O95944 276 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 SLPIP03973 132 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 FGF6P10767 208 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 C15orf56Q8N910 161 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 CLRN3Q8NCR9 226 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 LYPD6BQ8NI32 183 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
RFTN1-211ENST00000495666 SMIM7Q9BQ49 75 aa6.85□□□□□ -1.31
RFTN1-211ENST00000495666 A0A087WYN8 130 aa6.84□□□□□ -1.31
RFTN1-211ENST00000495666 A0A1B0GUV1 79 aa6.84□□□□□ -1.31
RFTN1-211ENST00000495666 TAGLN2P37802 199 aaKnown RBP6.84□□□□□ -1.31
RFTN1-211ENST00000495666 BLOC1S1P78537 153 aa6.84□□□□□ -1.31
RFTN1-211ENST00000495666 COX6A2Q02221 97 aa6.84□□□□□ -1.31
RFTN1-211ENST00000495666 MAJINQ3KP22 176 aa6.84□□□□□ -1.31
RFTN1-211ENST00000495666 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
RFTN1-211ENST00000495666 A8MWL6 223 aa6.83□□□□□ -1.32
RFTN1-211ENST00000495666 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
RFTN1-211ENST00000495666 TMEM101Q96IK0 257 aa6.83□□□□□ -1.32
RFTN1-211ENST00000495666 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 HIGD1CA8MV81 97 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 I3L3M4 83 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 PHOX2AO14813 284 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 CCL25O15444 150 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 CNBPP62633 177 aaKnown RBP6.82□□□□□ -1.32
RFTN1-211ENST00000495666 AMN1Q8IY45 258 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 OR5A1Q8NGJ0 315 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 PRSS3P2Q8NHM4 247 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 ST20Q9HBF5 79 aa6.82□□□□□ -1.32
RFTN1-211ENST00000495666 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
RFTN1-211ENST00000495666 RPS10P46783 165 aaKnown RBP6.81□□□□□ -1.32
RFTN1-211ENST00000495666 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
RFTN1-211ENST00000495666 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
RFTN1-211ENST00000495666 MRAP2Q96G30 205 aa6.81□□□□□ -1.32
RFTN1-211ENST00000495666 A0A1B0GUT8 65 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 OXTP01178 125 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 TSHBP01222 138 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 FCER1GP30273 86 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 ADIRFQ15847 76 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 LINC01551Q86U37 167 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 STPG4Q8N801 248 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
RFTN1-211ENST00000495666 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
RFTN1-211ENST00000495666 A0A096LNI7 61 aa6.79□□□□□ -1.32
RFTN1-211ENST00000495666 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
RFTN1-211ENST00000495666 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
RFTN1-211ENST00000495666 FOXI1Q12951 378 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms