RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ESDP10768 282 aa7.92□□□□□ -1.14
MCF2L-231ENST00000494043 FCER1GP30273 86 aa7.92□□□□□ -1.14
MCF2L-231ENST00000494043 COTL1Q14019 142 aa7.92□□□□□ -1.14
MCF2L-231ENST00000494043 LAGE3Q14657 143 aa7.92□□□□□ -1.14
MCF2L-231ENST00000494043 ORMDL2Q53FV1 153 aa7.92□□□□□ -1.14
MCF2L-231ENST00000494043 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
MCF2L-231ENST00000494043 HSBP1O75506 76 aa7.91□□□□□ -1.14
MCF2L-231ENST00000494043 NUDT3O95989 172 aa7.91□□□□□ -1.14
MCF2L-231ENST00000494043 C15orf53Q8NAA6 179 aa7.91□□□□□ -1.14
MCF2L-231ENST00000494043 GTSF1LQ9H1H1 148 aa7.91□□□□□ -1.14
MCF2L-231ENST00000494043 IGHV1-24A0A0C4DH33 117 aa7.9□□□□□ -1.14
MCF2L-231ENST00000494043 NUPR2A6NF83 97 aa7.9□□□□□ -1.14
MCF2L-231ENST00000494043 C5orf52A6NGY3 159 aa7.9□□□□□ -1.14
MCF2L-231ENST00000494043 IGLL5B9A064 214 aa7.9□□□□□ -1.14
MCF2L-231ENST00000494043 SNRPEP62304 92 aaKnown RBP7.9□□□□□ -1.14
MCF2L-231ENST00000494043 TMEM97Q5BJF2 176 aa7.9□□□□□ -1.14
MCF2L-231ENST00000494043 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
MCF2L-231ENST00000494043 NTM-AS1Q6ZSK4 140 aa7.9□□□□□ -1.14
MCF2L-231ENST00000494043 HBDP02042 147 aa7.89□□□□□ -1.15
MCF2L-231ENST00000494043 AMTP48728 403 aa7.89□□□□□ -1.15
MCF2L-231ENST00000494043 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
MCF2L-231ENST00000494043 HIST3H2BBQ8N257 126 aa7.89□□□□□ -1.15
MCF2L-231ENST00000494043 FAM19A2Q8N3H0 131 aa7.89□□□□□ -1.15
MCF2L-231ENST00000494043 CHCHD7Q9BUK0 85 aa7.89□□□□□ -1.15
MCF2L-231ENST00000494043 A0A096LNJ9 63 aa7.88□□□□□ -1.15
MCF2L-231ENST00000494043 TRBV6-8A0A0A6YYG3 113 aa7.88□□□□□ -1.15
MCF2L-231ENST00000494043 TIRAPP58753 221 aa7.88□□□□□ -1.15
MCF2L-231ENST00000494043 PDZD11Q5EBL8 140 aa7.88□□□□□ -1.15
MCF2L-231ENST00000494043 C20orf203Q8NBC4 194 aa7.88□□□□□ -1.15
MCF2L-231ENST00000494043 TRBV25-1A0A075B6N4 114 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 BTF3P20290 206 aaKnown RBP7.87□□□□□ -1.15
MCF2L-231ENST00000494043 G0S2P27469 103 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 LYPD5Q6UWN5 251 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 C2orf66Q6UXQ4 117 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 WWC2-AS2Q96NR7 200 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 TMEM243Q9BU79 118 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 CYSLTR1Q9Y271 337 aa7.87□□□□□ -1.15
MCF2L-231ENST00000494043 KLK5Q9Y337 293 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-231ENST00000494043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.86□□□□□ -1.15
MCF2L-231ENST00000494043 IGKV2-29A2NJV5 120 aaPredicted RBP7.86□□□□□ -1.15
MCF2L-231ENST00000494043 S100A2P29034 98 aa7.86□□□□□ -1.15
MCF2L-231ENST00000494043 RPL39P62891 51 aaKnown RBP7.86□□□□□ -1.15
MCF2L-231ENST00000494043 LELP1Q5T871 98 aa7.86□□□□□ -1.15
MCF2L-231ENST00000494043 MUC7Q8TAX7 377 aa7.86□□□□□ -1.15
MCF2L-231ENST00000494043 TOMM6Q96B49 74 aa7.86□□□□□ -1.15
MCF2L-231ENST00000494043 LINC01549A6NIU2 74 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 ESRGQ1W209 222 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 TMEM18Q96B42 140 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 PACRGQ96M98 296 aaPredicted RBP7.85□□□□□ -1.15
MCF2L-231ENST00000494043 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 CHCHD5Q9BSY4 110 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 APLNQ9ULZ1 77 aa7.85□□□□□ -1.15
MCF2L-231ENST00000494043 H7C423 109 aa7.84□□□□□ -1.15
MCF2L-231ENST00000494043 UBE2L6O14933 153 aa7.84□□□□□ -1.15
MCF2L-231ENST00000494043 LEPROTL1O95214 131 aa7.84□□□□□ -1.15
MCF2L-231ENST00000494043 TCTAP57738 103 aa7.84□□□□□ -1.15
MCF2L-231ENST00000494043 ZFAND6Q6FIF0 208 aa7.84□□□□□ -1.15
MCF2L-231ENST00000494043 STARD9Q9P2P6 4700 aa7.84□□□□□ -1.15
MCF2L-231ENST00000494043 CSMD3Q7Z407 3707 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 FABP4P15090 132 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 GAGE6Q13070 117 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 MRPL52Q86TS9 123 aaKnown RBP7.83□□□□□ -1.16
MCF2L-231ENST00000494043 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 SPANXA1Q9NS26 97 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 HSPB8Q9UJY1 196 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 UBE2D4Q9Y2X8 147 aa7.83□□□□□ -1.16
MCF2L-231ENST00000494043 PLECQ15149 4684 aaKnown RBP7.82□□□□□ -1.16
MCF2L-231ENST00000494043 TRAV8-6A0A0B4J262 113 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 IGIPA6NJ69 53 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 ATP5LO75964 103 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 FGF6P10767 208 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 SMAGPQ0VAQ4 97 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 LINC00173Q6ZV60 143 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 ERASQ7Z444 233 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 TIMM17AQ99595 171 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 TIMM21Q9BVV7 248 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 MRPS16Q9Y3D3 137 aaKnown RBP7.82□□□□□ -1.16
MCF2L-231ENST00000494043 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
MCF2L-231ENST00000494043 ZNF25P17030 456 aaPredicted RBP7.81□□□□□ -1.16
MCF2L-231ENST00000494043 CCL18P55774 89 aa7.81□□□□□ -1.16
MCF2L-231ENST00000494043 PKIAP61925 76 aa7.81□□□□□ -1.16
MCF2L-231ENST00000494043 AMMECR1LQ6DCA0 310 aa7.81□□□□□ -1.16
MCF2L-231ENST00000494043 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
MCF2L-231ENST00000494043 LINC00588Q9Y4M8 146 aa7.81□□□□□ -1.16
MCF2L-231ENST00000494043 TENM2Q9NT68 2774 aa7.8□□□□□ -1.16
MCF2L-231ENST00000494043 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
MCF2L-231ENST00000494043 TMEM262E9PQX1 116 aa7.8□□□□□ -1.16
MCF2L-231ENST00000494043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.8□□□□□ -1.16
MCF2L-231ENST00000494043 NPSP0C0P6 89 aa7.8□□□□□ -1.16
MCF2L-231ENST00000494043 WFDC10BQ8IUB3 73 aa7.8□□□□□ -1.16
MCF2L-231ENST00000494043 IFI27L1Q96BM0 104 aa7.8□□□□□ -1.16
MCF2L-231ENST00000494043 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
MCF2L-231ENST00000494043 A0A1B0GUV1 79 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 RBX1P62877 108 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
MCF2L-231ENST00000494043 MPV17L2Q567V2 206 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 Q6ZUT4 128 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 OR5A1Q8NGJ0 315 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 305.7 ms