RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 H3BNG1 76 aa8.83□□□□□ -1
VPS52-220ENST00000493674 HBDP02042 147 aa8.83□□□□□ -1
VPS52-220ENST00000493674 GAGE1Q13065 139 aa8.83□□□□□ -1
VPS52-220ENST00000493674 GAGE4Q13068 117 aa8.83□□□□□ -1
VPS52-220ENST00000493674 GAGE5Q13069 117 aa8.83□□□□□ -1
VPS52-220ENST00000493674 PMCHL1Q16048 86 aa8.83□□□□□ -1
VPS52-220ENST00000493674 GAGE13Q4V321 117 aa8.83□□□□□ -1
VPS52-220ENST00000493674 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
VPS52-220ENST00000493674 KIR2DL4Q99706 377 aa8.83□□□□□ -1
VPS52-220ENST00000493674 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
VPS52-220ENST00000493674 TRAV26-1A0A087WT03 109 aa8.82□□□□□ -1
VPS52-220ENST00000493674 F5H768 121 aa8.82□□□□□ -1
VPS52-220ENST00000493674 PAX4O43316 350 aa8.82□□□□□ -1
VPS52-220ENST00000493674 FABP4P15090 132 aa8.82□□□□□ -1
VPS52-220ENST00000493674 GYPEP15421 78 aa8.82□□□□□ -1
VPS52-220ENST00000493674 S100A2P29034 98 aa8.82□□□□□ -1
VPS52-220ENST00000493674 CHCHD7Q9BUK0 85 aa8.81□□□□□ -1
VPS52-220ENST00000493674 GTSF1LQ9H1H1 148 aa8.81□□□□□ -1
VPS52-220ENST00000493674 IGHV3-38A0A0C4DH36 116 aa8.8□□□□□ -1
VPS52-220ENST00000493674 HTN3P15516 51 aa8.8□□□□□ -1
VPS52-220ENST00000493674 COTL1Q14019 142 aa8.8□□□□□ -1
VPS52-220ENST00000493674 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
VPS52-220ENST00000493674 LINC00173Q6ZV60 143 aa8.8□□□□□ -1
VPS52-220ENST00000493674 C20orf203Q8NBC4 194 aa8.8□□□□□ -1
VPS52-220ENST00000493674 PHLDA1Q8WV24 401 aaPredicted RBP8.8□□□□□ -1
VPS52-220ENST00000493674 TOMM6Q96B49 74 aa8.8□□□□□ -1
VPS52-220ENST00000493674 DEFB131BA0A096LNP1 70 aa8.79□□□□□ -1
VPS52-220ENST00000493674 TRAV10A0A0B4J240 114 aa8.79□□□□□ -1
VPS52-220ENST00000493674 A0A0J9YY99 117 aa8.79□□□□□ -1
VPS52-220ENST00000493674 LINC01549A6NIU2 74 aa8.79□□□□□ -1
VPS52-220ENST00000493674 LEPROTL1O95214 131 aa8.79□□□□□ -1
VPS52-220ENST00000493674 NUDT3O95989 172 aa8.79□□□□□ -1
VPS52-220ENST00000493674 G0S2P27469 103 aa8.79□□□□□ -1
VPS52-220ENST00000493674 WWC2-AS2Q96NR7 200 aa8.79□□□□□ -1
VPS52-220ENST00000493674 A0A096LPF7 62 aa8.78□□□□□ -1
VPS52-220ENST00000493674 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
VPS52-220ENST00000493674 TMEM97Q5BJF2 176 aa8.78□□□□□ -1
VPS52-220ENST00000493674 C2orf66Q6UXQ4 117 aa8.78□□□□□ -1
VPS52-220ENST00000493674 OR10D4PQ8NGN7 298 aa8.78□□□□□ -1
VPS52-220ENST00000493674 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
VPS52-220ENST00000493674 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
VPS52-220ENST00000493674 CYSLTR1Q9Y271 337 aa8.78□□□□□ -1
VPS52-220ENST00000493674 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
VPS52-220ENST00000493674 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
VPS52-220ENST00000493674 BTF3P20290 206 aaKnown RBP8.77□□□□□ -1.01
VPS52-220ENST00000493674 TIRAPP58753 221 aa8.77□□□□□ -1.01
VPS52-220ENST00000493674 RPL39P62891 51 aaKnown RBP8.77□□□□□ -1.01
VPS52-220ENST00000493674 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
VPS52-220ENST00000493674 HSPB8Q9UJY1 196 aa8.77□□□□□ -1.01
VPS52-220ENST00000493674 CSMD3Q7Z407 3707 aa8.77□□□□□ -1.01
VPS52-220ENST00000493674 TRBV6-8A0A0A6YYG3 113 aa8.76□□□□□ -1.01
VPS52-220ENST00000493674 IGIPA6NJ69 53 aa8.76□□□□□ -1.01
VPS52-220ENST00000493674 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
VPS52-220ENST00000493674 ATP5LO75964 103 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 ERASQ7Z444 233 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 SPATA12Q7Z6I5 190 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 PYGO1Q9Y3Y4 419 aa8.75□□□□□ -1.01
VPS52-220ENST00000493674 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 H7C423 109 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 NPSP0C0P6 89 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 MRPL52Q86TS9 123 aaKnown RBP8.74□□□□□ -1.01
VPS52-220ENST00000493674 Q8N976 141 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 IFI27L1Q96BM0 104 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
VPS52-220ENST00000493674 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
VPS52-220ENST00000493674 TMEM141Q96I45 108 aa8.73□□□□□ -1.01
VPS52-220ENST00000493674 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
VPS52-220ENST00000493674 SPANXA1Q9NS26 97 aa8.73□□□□□ -1.01
VPS52-220ENST00000493674 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.72□□□□□ -1.01
VPS52-220ENST00000493674 IGKV2-29A2NJV5 120 aaPredicted RBP8.72□□□□□ -1.01
VPS52-220ENST00000493674 KRTDAPP60985 99 aa8.72□□□□□ -1.01
VPS52-220ENST00000493674 JOSD1Q15040 202 aaPredicted RBP8.72□□□□□ -1.01
VPS52-220ENST00000493674 PYY3Q5JQD4 70 aa8.72□□□□□ -1.01
VPS52-220ENST00000493674 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
VPS52-220ENST00000493674 C15orf53Q8NAA6 179 aa8.72□□□□□ -1.01
VPS52-220ENST00000493674 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
VPS52-220ENST00000493674 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
VPS52-220ENST00000493674 IGLV4-3A0A075B6K6 122 aa8.71□□□□□ -1.02
VPS52-220ENST00000493674 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
VPS52-220ENST00000493674 MRPS36P82909 103 aaKnown RBP8.71□□□□□ -1.02
VPS52-220ENST00000493674 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
VPS52-220ENST00000493674 LYPD5Q6UWN5 251 aa8.71□□□□□ -1.02
VPS52-220ENST00000493674 BAALCQ8WXS3 180 aa8.71□□□□□ -1.02
VPS52-220ENST00000493674 PLECQ15149 4684 aaKnown RBP8.7□□□□□ -1.02
VPS52-220ENST00000493674 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
VPS52-220ENST00000493674 C3orf84H3BNL1 204 aa8.7□□□□□ -1.02
VPS52-220ENST00000493674 FGF6P10767 208 aa8.7□□□□□ -1.02
VPS52-220ENST00000493674 LELP1Q5T871 98 aa8.7□□□□□ -1.02
VPS52-220ENST00000493674 AMELXQ99217 191 aa8.7□□□□□ -1.02
VPS52-220ENST00000493674 STARD9Q9P2P6 4700 aa8.69□□□□□ -1.02
VPS52-220ENST00000493674 ZNF25P17030 456 aaPredicted RBP8.69□□□□□ -1.02
VPS52-220ENST00000493674 SMAGPQ0VAQ4 97 aa8.69□□□□□ -1.02
VPS52-220ENST00000493674 ODF1Q14990 250 aa8.69□□□□□ -1.02
VPS52-220ENST00000493674 LGALS9CQ6DKI2 356 aa8.69□□□□□ -1.02
VPS52-220ENST00000493674 MUC7Q8TAX7 377 aa8.69□□□□□ -1.02
VPS52-220ENST00000493674 TENM2Q9NT68 2774 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms