RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
SNED1-212ENST00000493358 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
SNED1-212ENST00000493358 BLOC1S1P78537 153 aa8.67□□□□□ -1.02
SNED1-212ENST00000493358 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
SNED1-212ENST00000493358 C20orf203Q8NBC4 194 aa8.67□□□□□ -1.02
SNED1-212ENST00000493358 RNASE7Q9H1E1 156 aaKnown RBP8.67□□□□□ -1.02
SNED1-212ENST00000493358 RPL37AP61513 92 aaKnown RBP8.66□□□□□ -1.02
SNED1-212ENST00000493358 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
SNED1-212ENST00000493358 TEX261Q6UWH6 196 aa8.66□□□□□ -1.02
SNED1-212ENST00000493358 AKAP14Q86UN6 197 aa8.66□□□□□ -1.02
SNED1-212ENST00000493358 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
SNED1-212ENST00000493358 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
SNED1-212ENST00000493358 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
SNED1-212ENST00000493358 TMEM250H0YL14 139 aa8.65□□□□□ -1.02
SNED1-212ENST00000493358 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.02
SNED1-212ENST00000493358 KRTAP26-1Q6PEX3 210 aa8.65□□□□□ -1.02
SNED1-212ENST00000493358 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
SNED1-212ENST00000493358 IGHV3-64A0A075B6Q5 118 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 IGKV3OR2-268A0A0C4DH90 116 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 A8MWL6 223 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 K7EN84 100 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 APCSP02743 223 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 CEBPGP53567 150 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
SNED1-212ENST00000493358 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
SNED1-212ENST00000493358 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
SNED1-212ENST00000493358 NCR2O95944 276 aa8.63□□□□□ -1.03
SNED1-212ENST00000493358 RNASEKQ6P5S7 137 aaKnown RBP8.63□□□□□ -1.03
SNED1-212ENST00000493358 ALKAL2Q6UX46 152 aa8.63□□□□□ -1.03
SNED1-212ENST00000493358 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
SNED1-212ENST00000493358 DPH3Q96FX2 82 aa8.63□□□□□ -1.03
SNED1-212ENST00000493358 OXTP01178 125 aa8.62□□□□□ -1.03
SNED1-212ENST00000493358 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
SNED1-212ENST00000493358 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
SNED1-212ENST00000493358 H7C423 109 aa8.61□□□□□ -1.03
SNED1-212ENST00000493358 CT83Q5H943 113 aa8.61□□□□□ -1.03
SNED1-212ENST00000493358 FAM231DQ6ZW35 169 aa8.61□□□□□ -1.03
SNED1-212ENST00000493358 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
SNED1-212ENST00000493358 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
SNED1-212ENST00000493358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
SNED1-212ENST00000493358 PKHD1L1Q86WI1 4243 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 SDHAF1A6NFY7 115 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 PMCHP20382 165 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 Q6ZNX1 250 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 TMEM101Q96IK0 257 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 SMIM7Q9BQ49 75 aa8.6□□□□□ -1.03
SNED1-212ENST00000493358 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
SNED1-212ENST00000493358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
SNED1-212ENST00000493358 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
SNED1-212ENST00000493358 FGF6P10767 208 aa8.59□□□□□ -1.03
SNED1-212ENST00000493358 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
SNED1-212ENST00000493358 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
SNED1-212ENST00000493358 RNF185Q96GF1 192 aa8.59□□□□□ -1.03
SNED1-212ENST00000493358 I3L3M4 83 aa8.58□□□□□ -1.04
SNED1-212ENST00000493358 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
SNED1-212ENST00000493358 CHCHD10Q8WYQ3 142 aaPredicted RBP8.58□□□□□ -1.04
SNED1-212ENST00000493358 ST20Q9HBF5 79 aa8.58□□□□□ -1.04
SNED1-212ENST00000493358 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
SNED1-212ENST00000493358 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
SNED1-212ENST00000493358 MRAP2Q96G30 205 aa8.57□□□□□ -1.04
SNED1-212ENST00000493358 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
SNED1-212ENST00000493358 TRBV6-5A0A0K0K1A5 114 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 ZNF727A8MUV8 499 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 PANO1I0J062 215 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 RPS10P46783 165 aaKnown RBP8.56□□□□□ -1.04
SNED1-212ENST00000493358 CIRBPQ14011 172 aaKnown RBP8.56□□□□□ -1.04
SNED1-212ENST00000493358 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 OR5A1Q8NGJ0 315 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 TSKUQ8WUA8 353 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 FAM210AQ96ND0 272 aa8.56□□□□□ -1.04
SNED1-212ENST00000493358 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
SNED1-212ENST00000493358 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
SNED1-212ENST00000493358 LINC01551Q86U37 167 aa8.55□□□□□ -1.04
SNED1-212ENST00000493358 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
SNED1-212ENST00000493358 C7orf33Q8WU49 177 aa8.55□□□□□ -1.04
SNED1-212ENST00000493358 TMEM191AQ9H0A3 160 aa8.55□□□□□ -1.04
SNED1-212ENST00000493358 TMEM242Q9NWH2 141 aa8.55□□□□□ -1.04
SNED1-212ENST00000493358 LRP1Q07954 4544 aaKnown RBP8.54□□□□□ -1.04
SNED1-212ENST00000493358 A0A087WYN8 130 aa8.54□□□□□ -1.04
SNED1-212ENST00000493358 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
SNED1-212ENST00000493358 SMAGPQ0VAQ4 97 aa8.54□□□□□ -1.04
SNED1-212ENST00000493358 RIGQ13278 110 aa8.54□□□□□ -1.04
SNED1-212ENST00000493358 OSTCQ9NRP0 149 aa8.54□□□□□ -1.04
SNED1-212ENST00000493358 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
SNED1-212ENST00000493358 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
SNED1-212ENST00000493358 C7orf77A4D0Y5 90 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 PPP1R17O96001 155 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 SLPIP03973 132 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 XCL1P47992 114 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 COX6A2Q02221 97 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 SS18Q15532 418 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 HMCN2Q8NDA2 5059 aa8.53□□□□□ -1.04
SNED1-212ENST00000493358 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
SNED1-212ENST00000493358 CCL25O15444 150 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms