RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 PEA15Q15121 130 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 SAPCD1Q5SSQ6 148 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 UQCC3Q6UW78 93 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 PRSS3P2Q8NHM4 247 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 DERL1Q9BUN8 251 aa7.47□□□□□ -1.21
GPNMB-214ENST00000492858 TRAV34A0A0B4J273 112 aa7.46□□□□□ -1.22
GPNMB-214ENST00000492858 RPL35P42766 123 aaKnown RBP7.46□□□□□ -1.22
GPNMB-214ENST00000492858 REG3AQ06141 175 aa7.46□□□□□ -1.22
GPNMB-214ENST00000492858 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
GPNMB-214ENST00000492858 NEXN-AS1Q8NBZ9 246 aa7.46□□□□□ -1.22
GPNMB-214ENST00000492858 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
GPNMB-214ENST00000492858 PHLDA3Q9Y5J5 127 aa7.46□□□□□ -1.22
GPNMB-214ENST00000492858 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 FABP5P3A8MUU1 101 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 M0R036 132 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 AKR1C3P42330 323 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 CRIP1P50238 77 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 ZNF674Q2M3X9 581 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
GPNMB-214ENST00000492858 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
GPNMB-214ENST00000492858 EIF5A2Q9GZV4 153 aaKnown RBP7.45□□□□□ -1.22
GPNMB-214ENST00000492858 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
GPNMB-214ENST00000492858 FAM74A3Q4VXF1 159 aa7.44□□□□□ -1.22
GPNMB-214ENST00000492858 C10orf91Q5T1B1 145 aa7.44□□□□□ -1.22
GPNMB-214ENST00000492858 Q6ZRP5 223 aa7.44□□□□□ -1.22
GPNMB-214ENST00000492858 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 C19orf71A6NCJ1 209 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 KRBOX1C9JBD0 128 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 P01737 135 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
GPNMB-214ENST00000492858 RAB4BP61018 213 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 TMEM97Q5BJF2 176 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 DNLZQ5SXM8 178 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 ZFP82Q8N141 532 aa7.43□□□□□ -1.22
GPNMB-214ENST00000492858 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 GZMBP10144 247 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 UBE2G1P62253 170 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 ZNF56Q15929 161 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 CENPWQ5EE01 88 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 OCC1Q8TAD7 63 aa7.42□□□□□ -1.22
GPNMB-214ENST00000492858 TMSB15BA0A087X1C1 80 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 A0A096LNI7 61 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 TMEM218A2RU14 115 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 K7EN84 100 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 CXCL1P09341 107 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 PRR27Q6MZM9 219 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 COMMD7Q86VX2 200 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 C20orf203Q8NBC4 194 aa7.41□□□□□ -1.22
GPNMB-214ENST00000492858 TRAV26-2A0A0B4J265 109 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 SH2D1AO60880 128 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 ADCYAP1P18509 176 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 GNG4P50150 75 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 LINC01551Q86U37 167 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 GFRA4Q9GZZ7 299 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.22
GPNMB-214ENST00000492858 IGLV4-60A0A075B6I1 120 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 ZNF727A8MUV8 499 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 PRR4Q16378 134 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 FAM162BQ5T6X4 162 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 CFAP161Q6P656 301 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 SMIM7Q9BQ49 75 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 LINC00474Q9P2X8 69 aa7.39□□□□□ -1.23
GPNMB-214ENST00000492858 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
GPNMB-214ENST00000492858 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
GPNMB-214ENST00000492858 CACNG7P62955 275 aa7.38□□□□□ -1.23
GPNMB-214ENST00000492858 TMEM241Q24JQ0 296 aa7.38□□□□□ -1.23
GPNMB-214ENST00000492858 SEC11CQ9BY50 192 aa7.38□□□□□ -1.23
GPNMB-214ENST00000492858 BIN3Q9NQY0 253 aa7.38□□□□□ -1.23
GPNMB-214ENST00000492858 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
GPNMB-214ENST00000492858 CARHSP1Q9Y2V2 147 aaKnown RBP7.38□□□□□ -1.23
GPNMB-214ENST00000492858 GAGE12HA6NDE8 117 aa7.37□□□□□ -1.23
GPNMB-214ENST00000492858 F5H697 171 aa7.37□□□□□ -1.23
GPNMB-214ENST00000492858 NDUFA5Q16718 116 aa7.37□□□□□ -1.23
GPNMB-214ENST00000492858 PRR26Q8N8Z3 221 aa7.37□□□□□ -1.23
GPNMB-214ENST00000492858 ISOC2Q96AB3 205 aa7.37□□□□□ -1.23
GPNMB-214ENST00000492858 FOXA3P55318 350 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-214ENST00000492858 PNRC1Q12796 327 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-214ENST00000492858 CT83Q5H943 113 aa7.36□□□□□ -1.23
GPNMB-214ENST00000492858 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
GPNMB-214ENST00000492858 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
GPNMB-214ENST00000492858 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-214ENST00000492858 OSTCQ9NRP0 149 aa7.36□□□□□ -1.23
GPNMB-214ENST00000492858 A0A1B0GUV1 79 aa7.35□□□□□ -1.23
GPNMB-214ENST00000492858 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
GPNMB-214ENST00000492858 OR10AG1Q8NH19 301 aa7.35□□□□□ -1.23
GPNMB-214ENST00000492858 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
GPNMB-214ENST00000492858 SNAI2O43623 268 aa7.34□□□□□ -1.23
GPNMB-214ENST00000492858 V9GYV3 84 aa7.34□□□□□ -1.23
GPNMB-214ENST00000492858 GVQW2A0A096LPI5 108 aaPredicted RBP7.33□□□□□ -1.24
GPNMB-214ENST00000492858 IGKV3OR2-268A0A0C4DH90 116 aa7.33□□□□□ -1.24
GPNMB-214ENST00000492858 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
GPNMB-214ENST00000492858 SLC7A5P1Q8MH63 180 aa7.33□□□□□ -1.24
GPNMB-214ENST00000492858 CNFNQ9BYD5 112 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms