RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ZNF124Q15973 351 aa8.66□□□□□ -1.02
SRGAP3-210ENST00000491467 UFSP1Q6NVU6 142 aa8.66□□□□□ -1.02
SRGAP3-210ENST00000491467 STARD9Q9P2P6 4700 aa8.66□□□□□ -1.02
SRGAP3-210ENST00000491467 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
SRGAP3-210ENST00000491467 TMEM208Q9BTX3 173 aa8.65□□□□□ -1.02
SRGAP3-210ENST00000491467 HIGD1BQ9P298 99 aa8.65□□□□□ -1.02
SRGAP3-210ENST00000491467 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-210ENST00000491467 IGIPA6NJ69 53 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 PF4P02776 101 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 FGF6P10767 208 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 HTN1P15515 57 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 CRYBA4P53673 196 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 C1orf158Q8N1D5 194 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 STPG4Q8N801 248 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 TNFRSF18Q9Y5U5 241 aa8.64□□□□□ -1.03
SRGAP3-210ENST00000491467 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 HINT1P49773 126 aaPredicted RBP8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 PMVKQ15126 192 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 BATFQ16520 125 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 IL17DQ8TAD2 202 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
SRGAP3-210ENST00000491467 SEC11AP67812 179 aa8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 DAZ2Q13117 558 aaKnown RBP8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 ZMAT5Q9UDW3 170 aaKnown RBP8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 TP53TG1Q9Y2A0 90 aa8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 PYGO1Q9Y3Y4 419 aa8.62□□□□□ -1.03
SRGAP3-210ENST00000491467 PRSS29PA6NIE9 313 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 TSHBP01222 138 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 MPV17L2Q567V2 206 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 C9orf66Q5T8R8 295 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 C2orf91Q6ZV80 131 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 C20orf203Q8NBC4 194 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 C16orf74Q96GX8 76 aa8.61□□□□□ -1.03
SRGAP3-210ENST00000491467 NMUP48645 174 aa8.6□□□□□ -1.03
SRGAP3-210ENST00000491467 HSD52Q0P140 79 aa8.6□□□□□ -1.03
SRGAP3-210ENST00000491467 GAGE1Q13065 139 aa8.6□□□□□ -1.03
SRGAP3-210ENST00000491467 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 TRBV10-1A0A0K0K1A3 114 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 AZU1P20160 251 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 HERVK_113P61574 105 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 TAL2Q16559 108 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 GTSCR1Q86UQ5 136 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 CST9LQ9H4G1 147 aa8.59□□□□□ -1.03
SRGAP3-210ENST00000491467 E9PLD3 99 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 P0DMU3 169 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 FAM231AP0DMU4 169 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 FAM231CP0DMU5 169 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 SMAGPQ0VAQ4 97 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 OR4C5Q8NGB2 326 aa8.58□□□□□ -1.04
SRGAP3-210ENST00000491467 A6NDN8 102 aa8.57□□□□□ -1.04
SRGAP3-210ENST00000491467 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
SRGAP3-210ENST00000491467 RRN3P1Q2M238 152 aa8.57□□□□□ -1.04
SRGAP3-210ENST00000491467 CSNK1G2-AS1Q8NCQ2 148 aa8.57□□□□□ -1.04
SRGAP3-210ENST00000491467 MRPL16Q9NX20 251 aaKnown RBP8.57□□□□□ -1.04
SRGAP3-210ENST00000491467 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 IGKV2D-26A0A0A0MRZ7 120 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 SMIM9A6NGZ8 99 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 RPL39P62891 51 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 OR11H2Q8NH07 326 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 SPANXA1Q9NS26 97 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-210ENST00000491467 HERC1Q15751 4861 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 TRBV25-1A0A075B6N4 114 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 TRGV1A0A0A0MS02 117 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 PRM2P04554 102 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 ZNF25P17030 456 aaPredicted RBP8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 RPL36AP83881 106 aaKnown RBP8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 COTL1Q14019 142 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 RPL36ALQ969Q0 106 aaKnown RBP8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 VCX2Q9H322 139 aa8.55□□□□□ -1.04
SRGAP3-210ENST00000491467 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 TRBV7-3A0A075B6L6 115 aa8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 IGHV3-73A0A0B4J1V6 119 aa8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 RPL35AP18077 110 aaKnown RBP8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 AMELXQ99217 191 aa8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
SRGAP3-210ENST00000491467 IGLV4-3A0A075B6K6 122 aa8.53□□□□□ -1.04
SRGAP3-210ENST00000491467 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
SRGAP3-210ENST00000491467 H3BRM9 83 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms