RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.5	□□□□□ -0.57
GGA1-223	ENST00000491295	IGLV10-54	A0A075B6I4	117 aa		11.49	□□□□□ -0.57
GGA1-223	ENST00000491295	COTL1	Q14019	142 aa		11.49	□□□□□ -0.57
GGA1-223	ENST00000491295	IGLV4-60	A0A075B6I1	120 aa		11.48	□□□□□ -0.57
GGA1-223	ENST00000491295	IGHV3-64	A0A075B6Q5	118 aa		11.48	□□□□□ -0.57
GGA1-223	ENST00000491295	CNFN	Q9BYD5	112 aa		11.48	□□□□□ -0.57
GGA1-223	ENST00000491295	CTRL	P40313	264 aa		11.47	□□□□□ -0.57
GGA1-223	ENST00000491295	AMT	P48728	403 aa		11.47	□□□□□ -0.57
GGA1-223	ENST00000491295	CFAP161	Q6P656	301 aa		11.47	□□□□□ -0.57
GGA1-223	ENST00000491295	LRP1	Q07954	4544 aa	Known RBP	11.47	□□□□□ -0.57
GGA1-223	ENST00000491295	TRBV20OR9-2	A0A075B6H5	130 aa		11.46	□□□□□ -0.57
GGA1-223	ENST00000491295	BCL2	P10415	239 aa		11.46	□□□□□ -0.57
GGA1-223	ENST00000491295	NUDT10	Q8NFP7	164 aa		11.46	□□□□□ -0.57
GGA1-223	ENST00000491295	NUDT11	Q96G61	164 aa		11.46	□□□□□ -0.57
GGA1-223	ENST00000491295	PANO1	I0J062	215 aa		11.45	□□□□□ -0.58
GGA1-223	ENST00000491295	TWIST1	Q15672	202 aa		11.45	□□□□□ -0.58
GGA1-223	ENST00000491295		Q6ZRU5	148 aa		11.45	□□□□□ -0.58
GGA1-223	ENST00000491295	DPH3	Q96FX2	82 aa		11.45	□□□□□ -0.58
GGA1-223	ENST00000491295	TEX261	Q6UWH6	196 aa		11.44	□□□□□ -0.58
GGA1-223	ENST00000491295	GFRA4	Q9GZZ7	299 aa		11.44	□□□□□ -0.58
GGA1-223	ENST00000491295		H7C423	109 aa		11.43	□□□□□ -0.58
GGA1-223	ENST00000491295	NCR2	O95944	276 aa		11.43	□□□□□ -0.58
GGA1-223	ENST00000491295	HNRNPA3	P51991	378 aa	Known RBP	11.43	□□□□□ -0.58
GGA1-223	ENST00000491295	SMIM15	Q7Z3B0	74 aa		11.43	□□□□□ -0.58
GGA1-223	ENST00000491295	RPP21	Q9H633	154 aa	Known RBP	11.43	□□□□□ -0.58
GGA1-223	ENST00000491295	PLA2G2D	Q9UNK4	145 aa		11.43	□□□□□ -0.58
GGA1-223	ENST00000491295	SLPI	P03973	132 aa		11.42	□□□□□ -0.58
GGA1-223	ENST00000491295	SLC51B	Q86UW2	128 aa		11.42	□□□□□ -0.58
GGA1-223	ENST00000491295	GATD1	Q8NB37	220 aa		11.42	□□□□□ -0.58
GGA1-223	ENST00000491295		A0A087WYN8	130 aa		11.41	□□□□□ -0.58
GGA1-223	ENST00000491295	AMMECR1L	Q6DCA0	310 aa		11.4	□□□□□ -0.58
GGA1-223	ENST00000491295	TCTE3	Q8IZS6	198 aa		11.4	□□□□□ -0.58
GGA1-223	ENST00000491295	OCC1	Q8TAD7	63 aa		11.4	□□□□□ -0.58
GGA1-223	ENST00000491295	SPACA4	Q8TDM5	124 aa		11.4	□□□□□ -0.58
GGA1-223	ENST00000491295	FAM210A	Q96ND0	272 aa		11.4	□□□□□ -0.58
GGA1-223	ENST00000491295	PLAC8	Q9NZF1	115 aa		11.4	□□□□□ -0.58
GGA1-223	ENST00000491295	GAGE12H	A6NDE8	117 aa		11.39	□□□□□ -0.59
GGA1-223	ENST00000491295	RPS10	P46783	165 aa	Known RBP	11.39	□□□□□ -0.59
GGA1-223	ENST00000491295	C15orf56	Q8N910	161 aa		11.39	□□□□□ -0.59
GGA1-223	ENST00000491295	RNASE7	Q9H1E1	156 aa	Known RBP	11.39	□□□□□ -0.59
GGA1-223	ENST00000491295	FAT3	Q8TDW7	4589 aa		11.39	□□□□□ -0.59
GGA1-223	ENST00000491295		K7EN84	100 aa		11.37	□□□□□ -0.59
GGA1-223	ENST00000491295	ZNF25	P17030	456 aa	Predicted RBP	11.37	□□□□□ -0.59
GGA1-223	ENST00000491295	C7orf33	Q8WU49	177 aa		11.37	□□□□□ -0.59
GGA1-223	ENST00000491295	PKHD1L1	Q86WI1	4243 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	TRAV26-2	A0A0B4J265	109 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295		A8MWL6	223 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	TMEM250	H0YL14	139 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	NDUFS6	O75380	124 aa	Known RBP	11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	APCS	P02743	223 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	CHTF8	P0CG12	524 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	RNASEK	Q6P5S7	137 aa	Known RBP	11.36	□□□□□ -0.59
GGA1-223	ENST00000491295		Q6ZNX1	250 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	GTSF1	Q8WW33	167 aa		11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.36	□□□□□ -0.59
GGA1-223	ENST00000491295	SDHAF1	A6NFY7	115 aa		11.35	□□□□□ -0.59
GGA1-223	ENST00000491295	FOXA3	P55318	350 aa	Predicted RBP	11.35	□□□□□ -0.59
GGA1-223	ENST00000491295	COX6A2	Q02221	97 aa		11.35	□□□□□ -0.59
GGA1-223	ENST00000491295	FAM231D	Q6ZW35	169 aa		11.35	□□□□□ -0.59
GGA1-223	ENST00000491295	PKIG	Q9Y2B9	76 aa		11.35	□□□□□ -0.59
GGA1-223	ENST00000491295	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	IGKV3OR2-268	A0A0C4DH90	116 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	TRBV6-5	A0A0K0K1A5	114 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295		I3L3M4	83 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	GATC	O43716	136 aa	Known RBP	11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	MT1HL1	P0DM35	61 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	FGF6	P10767	208 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	OR5A1	Q8NGJ0	315 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	RPL39L	Q96EH5	51 aa	Known RBP	11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	BTF3L4	Q96K17	158 aa		11.34	□□□□□ -0.59
GGA1-223	ENST00000491295	PMCH	P20382	165 aa		11.33	□□□□□ -0.6
GGA1-223	ENST00000491295	CT83	Q5H943	113 aa		11.33	□□□□□ -0.6
GGA1-223	ENST00000491295	TMEM101	Q96IK0	257 aa		11.33	□□□□□ -0.6
GGA1-223	ENST00000491295	LINC00474	Q9P2X8	69 aa		11.33	□□□□□ -0.6
GGA1-223	ENST00000491295	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.32	□□□□□ -0.6
GGA1-223	ENST00000491295	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.32	□□□□□ -0.6
GGA1-223	ENST00000491295	BLOC1S1	P78537	153 aa		11.32	□□□□□ -0.6
GGA1-223	ENST00000491295	BORCS7	Q96B45	105 aa		11.32	□□□□□ -0.6
GGA1-223	ENST00000491295	PHOX2A	O14813	284 aa		11.31	□□□□□ -0.6
GGA1-223	ENST00000491295	FOXI1	Q12951	378 aa		11.31	□□□□□ -0.6
GGA1-223	ENST00000491295	HIGD2B	Q4VC39	106 aa		11.31	□□□□□ -0.6
GGA1-223	ENST00000491295	PRSS3P2	Q8NHM4	247 aa		11.31	□□□□□ -0.6
GGA1-223	ENST00000491295	FAM231B	A6NCW3	169 aa		11.3	□□□□□ -0.6
GGA1-223	ENST00000491295	ESD	P10768	282 aa		11.3	□□□□□ -0.6
GGA1-223	ENST00000491295	MAJIN	Q3KP22	176 aa		11.3	□□□□□ -0.6
GGA1-223	ENST00000491295	ST20	Q9HBF5	79 aa		11.3	□□□□□ -0.6
GGA1-223	ENST00000491295	HMCN2	Q8NDA2	5059 aa		11.3	□□□□□ -0.6
GGA1-223	ENST00000491295	IGHV1-58	A0A0C4DH39	117 aa		11.29	□□□□□ -0.6
GGA1-223	ENST00000491295	LYPD6B	Q8NI32	183 aa		11.29	□□□□□ -0.6
GGA1-223	ENST00000491295	MRAP2	Q96G30	205 aa		11.29	□□□□□ -0.6
GGA1-223	ENST00000491295	LINC00959	A0A1B0GUT2	108 aa		11.28	□□□□□ -0.6
GGA1-223	ENST00000491295	STPG4	Q8N801	248 aa		11.28	□□□□□ -0.6
GGA1-223	ENST00000491295	TMEM191A	Q9H0A3	160 aa		11.28	□□□□□ -0.6
GGA1-223	ENST00000491295	IGKV2-24	A0A0C4DH68	120 aa		11.27	□□□□□ -0.61
GGA1-223	ENST00000491295		A0A1B0GUT8	65 aa		11.27	□□□□□ -0.61
GGA1-223	ENST00000491295	XCL1	P47992	114 aa		11.27	□□□□□ -0.61
GGA1-223	ENST00000491295	SS18	Q15532	418 aa		11.27	□□□□□ -0.61
GGA1-223	ENST00000491295	MRPL52	Q86TS9	123 aa	Known RBP	11.27	□□□□□ -0.61
GGA1-223	ENST00000491295	TRBV27	A0A0K0K1C4	114 aa		11.26	□□□□□ -0.61
GGA1-223	ENST00000491295	CCL25	O15444	150 aa		11.26	□□□□□ -0.61

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