RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 NIT1Q86X76 327 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 LINC00612Q8N6U2 182 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 CELA1Q9UNI1 258 aa5.32□□□□□ -1.56
CLDN1-202ENST00000490800 HERC2O95714 4834 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 DEFB131BA0A096LNP1 70 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 PRSS47A8MTI9 375 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 RHODO00212 210 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 GAGE7O76087 117 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 GAGE12FP0CL80 117 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 GAGE12GP0CL81 117 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 GAGE12IP0CL82 117 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 IFI27P40305 119 aaPredicted RBP5.31□□□□□ -1.56
CLDN1-202ENST00000490800 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 RNASEKQ6P5S7 137 aaKnown RBP5.31□□□□□ -1.56
CLDN1-202ENST00000490800 ZFP2Q6ZN57 461 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 OR4C5Q8NGB2 326 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 ZNF479Q96JC4 524 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 MAP1LC3AQ9H492 121 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
CLDN1-202ENST00000490800 IGLV2-18A0A075B6J9 118 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 TRGV2A0A075B6R0 118 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 TRBV6-5A0A0K0K1A5 114 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 LINC01546A6NGU7 62 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 LYRM9A8MSI8 78 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 PPP1R17O96001 155 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 IGHV3-53P01767 116 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 LINC00614P0C842 121 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 FAM222AQ5U5X8 452 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 FA2HQ7L5A8 372 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 PRSS3P2Q8NHM4 247 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 CHCHD1Q96BP2 118 aaKnown RBP5.3□□□□□ -1.56
CLDN1-202ENST00000490800 HIST1H2BLQ99880 126 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
CLDN1-202ENST00000490800 P0DMU3 169 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 FAM231AP0DMU4 169 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 FAM231CP0DMU5 169 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 S100A2P29034 98 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 POLR2KP53803 58 aaKnown RBP5.29□□□□□ -1.56
CLDN1-202ENST00000490800 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 RPL32P62910 135 aaKnown RBP5.29□□□□□ -1.56
CLDN1-202ENST00000490800 FOXI1Q12951 378 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 Q8N8P6 123 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 C18orf15Q96N68 181 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 SMIM2Q9BVW6 85 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 ST20Q9HBF5 79 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 NXT2Q9NPJ8 142 aaKnown RBP5.29□□□□□ -1.56
CLDN1-202ENST00000490800 Q9UF83 564 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
CLDN1-202ENST00000490800 H7C1H1 209 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 CIDEAO60543 219 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 HSBP1O75506 76 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 NPSP0C0P6 89 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 SPART-AS1P0CW21 52 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 FABP4P15090 132 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 PMCHP20382 165 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 AMTP48728 403 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 FHL2Q14192 279 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 PMCHL1Q16048 86 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 NEXN-AS1Q8NBZ9 246 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 TMEM18Q96B42 140 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
CLDN1-202ENST00000490800 TMEM70Q9BUB7 260 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 NIT2Q9NQR4 276 aa5.28□□□□□ -1.56
CLDN1-202ENST00000490800 A0A096LNJ9 63 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 IGHV1-24A0A0C4DH33 117 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 SDHAF1A6NFY7 115 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 K7EQD1 137 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 VCYO14598 125 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 TCAPO15273 167 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 NEGR1Q7Z3B1 354 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 OR10D4PQ8NGN7 298 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 DNAJC30Q96LL9 226 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
CLDN1-202ENST00000490800 TRGV4A0A0C4DH28 118 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 TRBV10-1A0A0K0K1A3 114 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 TRBV27A0A0K0K1C4 114 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 M0R2N4 97 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 AKR1D1P51857 326 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 DAD1P61803 113 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 LAGE3Q14657 143 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 SLC25A29Q8N8R3 303 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 KRTAP17-1Q9BYP8 105 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 TNFRSF18Q9Y5U5 241 aa5.26□□□□□ -1.57
CLDN1-202ENST00000490800 DNAH6Q9C0G6 4158 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 TEX48A0A1B0GUV7 120 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 TRBV6-4A0A1B0GX49 114 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 I3L3M4 83 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 K7EMI3 77 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 TSHBP01222 138 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 HTN3P15516 51 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 FCER1GP30273 86 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
CLDN1-202ENST00000490800 HECTD4Q9Y4D8 3996 aa5.24□□□□□ -1.57
CLDN1-202ENST00000490800 TRBV7-3A0A075B6L6 115 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms