RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SIVA1O15304 175 aa10.96□□□□□ -0.65
CLIC4-203ENST00000489758 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.65
CLIC4-203ENST00000489758 DNAH1Q9P2D7 4330 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 DNAH10OSP0CZ25 163 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 AMTP48728 403 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 CHCHD7Q9BUK0 85 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
CLIC4-203ENST00000489758 TRGC2P03986 189 aa10.94□□□□□ -0.66
CLIC4-203ENST00000489758 NIT1Q86X76 327 aa10.94□□□□□ -0.66
CLIC4-203ENST00000489758 Q8N3U1 123 aa10.94□□□□□ -0.66
CLIC4-203ENST00000489758 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
CLIC4-203ENST00000489758 RYR2Q92736 4967 aa10.94□□□□□ -0.66
CLIC4-203ENST00000489758 ESDP10768 282 aa10.93□□□□□ -0.66
CLIC4-203ENST00000489758 LINC01556Q5JQF7 62 aa10.93□□□□□ -0.66
CLIC4-203ENST00000489758 Q8N8P6 123 aa10.93□□□□□ -0.66
CLIC4-203ENST00000489758 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
CLIC4-203ENST00000489758 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
CLIC4-203ENST00000489758 TCAPO15273 167 aa10.92□□□□□ -0.66
CLIC4-203ENST00000489758 FCER1GP30273 86 aa10.92□□□□□ -0.66
CLIC4-203ENST00000489758 KRTAP1-5Q9BYS1 174 aa10.92□□□□□ -0.66
CLIC4-203ENST00000489758 NBDYA0A0U1RRE5 68 aa10.91□□□□□ -0.66
CLIC4-203ENST00000489758 IFI27P40305 119 aaPredicted RBP10.91□□□□□ -0.66
CLIC4-203ENST00000489758 Q6ZR54 194 aa10.91□□□□□ -0.66
CLIC4-203ENST00000489758 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
CLIC4-203ENST00000489758 NXT2Q9NPJ8 142 aaKnown RBP10.91□□□□□ -0.66
CLIC4-203ENST00000489758 SACSQ9NZJ4 4579 aa10.91□□□□□ -0.66
CLIC4-203ENST00000489758 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.9□□□□□ -0.66
CLIC4-203ENST00000489758 IGKV2-29A2NJV5 120 aaPredicted RBP10.9□□□□□ -0.66
CLIC4-203ENST00000489758 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
CLIC4-203ENST00000489758 IGHV3-33P01772 117 aa10.9□□□□□ -0.66
CLIC4-203ENST00000489758 IGHV3-30-3P0DP02 117 aa10.9□□□□□ -0.66
CLIC4-203ENST00000489758 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
CLIC4-203ENST00000489758 GAGE6Q13070 117 aa10.9□□□□□ -0.66
CLIC4-203ENST00000489758 MPV17L2Q567V2 206 aa10.9□□□□□ -0.66
CLIC4-203ENST00000489758 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
CLIC4-203ENST00000489758 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
CLIC4-203ENST00000489758 H7C423 109 aa10.89□□□□□ -0.67
CLIC4-203ENST00000489758 M0R2N4 97 aa10.88□□□□□ -0.67
CLIC4-203ENST00000489758 PKIAP61925 76 aa10.88□□□□□ -0.67
CLIC4-203ENST00000489758 RBX1P62877 108 aa10.88□□□□□ -0.67
CLIC4-203ENST00000489758 Q8N976 141 aa10.88□□□□□ -0.67
CLIC4-203ENST00000489758 C20orf203Q8NBC4 194 aa10.88□□□□□ -0.67
CLIC4-203ENST00000489758 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
CLIC4-203ENST00000489758 A0A087WX48 190 aa10.87□□□□□ -0.67
CLIC4-203ENST00000489758 K7EMI3 77 aa10.87□□□□□ -0.67
CLIC4-203ENST00000489758 K7EP13 123 aa10.87□□□□□ -0.67
CLIC4-203ENST00000489758 UBE2L6O14933 153 aa10.87□□□□□ -0.67
CLIC4-203ENST00000489758 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
CLIC4-203ENST00000489758 PRSS3P2Q8NHM4 247 aa10.87□□□□□ -0.67
CLIC4-203ENST00000489758 TRAV9-2A0A087WT02 112 aa10.86□□□□□ -0.67
CLIC4-203ENST00000489758 A0A1B0GUV1 79 aa10.86□□□□□ -0.67
CLIC4-203ENST00000489758 FGF6P10767 208 aa10.86□□□□□ -0.67
CLIC4-203ENST00000489758 LAGE3Q14657 143 aa10.86□□□□□ -0.67
CLIC4-203ENST00000489758 IGLV4-60A0A075B6I1 120 aa10.85□□□□□ -0.67
CLIC4-203ENST00000489758 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
CLIC4-203ENST00000489758 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
CLIC4-203ENST00000489758 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
CLIC4-203ENST00000489758 RPL39P62891 51 aaKnown RBP10.84□□□□□ -0.67
CLIC4-203ENST00000489758 Q0VG73 95 aa10.84□□□□□ -0.67
CLIC4-203ENST00000489758 FA2HQ7L5A8 372 aa10.84□□□□□ -0.67
CLIC4-203ENST00000489758 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
CLIC4-203ENST00000489758 UBE2D4Q9Y2X8 147 aa10.84□□□□□ -0.67
CLIC4-203ENST00000489758 EPPK1P58107 5090 aaKnown RBP10.83□□□□□ -0.68
CLIC4-203ENST00000489758 LINC00614P0C842 121 aa10.83□□□□□ -0.68
CLIC4-203ENST00000489758 ZNF25P17030 456 aaPredicted RBP10.83□□□□□ -0.68
CLIC4-203ENST00000489758 AMMECR1LQ6DCA0 310 aa10.83□□□□□ -0.68
CLIC4-203ENST00000489758 TIMM21Q9BVV7 248 aa10.83□□□□□ -0.68
CLIC4-203ENST00000489758 KLK12Q9UKR0 248 aa10.83□□□□□ -0.68
CLIC4-203ENST00000489758 KMT2AQ03164 3969 aa10.82□□□□□ -0.68
CLIC4-203ENST00000489758 ANGP03950 147 aaKnown RBP10.82□□□□□ -0.68
CLIC4-203ENST00000489758 RNASEKQ6P5S7 137 aaKnown RBP10.82□□□□□ -0.68
CLIC4-203ENST00000489758 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
CLIC4-203ENST00000489758 TMEM18Q96B42 140 aa10.82□□□□□ -0.68
CLIC4-203ENST00000489758 PRR34Q9NV39 138 aa10.82□□□□□ -0.68
CLIC4-203ENST00000489758 CSDC2Q9Y534 153 aaKnown RBP10.82□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 RAB5BP61020 215 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
CLIC4-203ENST00000489758 ENHOQ6UWT2 76 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 DNAH6Q9C0G6 4158 aa10.81□□□□□ -0.68
CLIC4-203ENST00000489758 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
CLIC4-203ENST00000489758 A0A096LNJ9 63 aa10.8□□□□□ -0.68
CLIC4-203ENST00000489758 BTF3P20290 206 aaKnown RBP10.8□□□□□ -0.68
CLIC4-203ENST00000489758 LINC00310P59036 64 aa10.8□□□□□ -0.68
CLIC4-203ENST00000489758 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
CLIC4-203ENST00000489758 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
CLIC4-203ENST00000489758 CDC42SE2Q9NRR3 84 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms