RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 HBDP02042 147 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 PRB2P02812 416 aaPredicted RBP5.49□□□□□ -1.53
SMC6-209ENST00000489535 P0DMU3 169 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 FAM231AP0DMU4 169 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 FAM231CP0DMU5 169 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 FAM222AQ5U5X8 452 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 Q8NAQ8 132 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 TMEM70Q9BUB7 260 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 ZMAT4Q9H898 229 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 RETNQ9HD89 108 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 A0A096LNJ9 63 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 LYRM9A8MSI8 78 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 K7EIL1 84 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 K7EQD1 137 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 CIDEAO60543 219 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 SMIM6P0DI80 62 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 DEFB130BP0DP73 79 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 DEFB130AP0DP74 79 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 FCER1GP30273 86 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 POLR2KP53803 58 aaKnown RBP5.48□□□□□ -1.53
SMC6-209ENST00000489535 KRTDAPP60985 99 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 RPL32P62910 135 aaKnown RBP5.48□□□□□ -1.53
SMC6-209ENST00000489535 LAGE3Q14657 143 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
SMC6-209ENST00000489535 NEGR1Q7Z3B1 354 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 LINC00612Q8N6U2 182 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 DNAJC30Q96LL9 226 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 TP53TG1Q9Y2A0 90 aa5.48□□□□□ -1.53
SMC6-209ENST00000489535 TRGV4A0A0C4DH28 118 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 TRBV27A0A0K0K1C4 114 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 K7EMI3 77 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 VCYO14598 125 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 C3orf79P0CE67 100 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 BTF3P20290 206 aaKnown RBP5.47□□□□□ -1.53
SMC6-209ENST00000489535 JOSD1Q15040 202 aaPredicted RBP5.47□□□□□ -1.53
SMC6-209ENST00000489535 ORMDL2Q53FV1 153 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 DEFB121Q5J5C9 76 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 PYY3Q5JQD4 70 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 LINC00173Q6ZV60 143 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 DEFB104AQ8WTQ1 72 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 RPL36ALQ969Q0 106 aaKnown RBP5.47□□□□□ -1.53
SMC6-209ENST00000489535 KIR2DL4Q99706 377 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 CELA1Q9UNI1 258 aa5.47□□□□□ -1.53
SMC6-209ENST00000489535 I3L3M4 83 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 SCGB1D1O95968 90 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 DAD1P61803 113 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 LINC00518Q8N0U6 118 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 SLC25A29Q8N8R3 303 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 ZNRF2Q8NHG8 242 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 C18orf15Q96N68 181 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 C12orf57Q99622 126 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 Q9UF83 564 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
SMC6-209ENST00000489535 HUWE1Q7Z6Z7 4374 aaKnown RBP5.46□□□□□ -1.54
SMC6-209ENST00000489535 TRBV10-1A0A0K0K1A3 114 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 H0Y8G0 127 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 TSHBP01222 138 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 SPART-AS1P0CW21 52 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 RPL36AP83881 106 aaKnown RBP5.45□□□□□ -1.54
SMC6-209ENST00000489535 RHOHQ15669 191 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 SBSPONQ8IVN8 264 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 PHLDA1Q8WV24 401 aaPredicted RBP5.45□□□□□ -1.54
SMC6-209ENST00000489535 MAP1LC3CQ9BXW4 147 aa5.45□□□□□ -1.54
SMC6-209ENST00000489535 TRBV7-3A0A075B6L6 115 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 IGHV3-38A0A0C4DH36 116 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 LOC100131303A0A0U1RQF7 123 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 TEX48A0A1B0GUV7 120 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 TRBV6-4A0A1B0GX49 114 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 GAGE12JA6NER3 117 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 GAGE1Q13065 139 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 GAGE4Q13068 117 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 GAGE5Q13069 117 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 C2orf66Q6UXQ4 117 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 NBEAL2Q6ZNJ1 2754 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 SPATA12Q7Z6I5 190 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 Q8N976 141 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 MRAPQ8TCY5 172 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 TOMM6Q96B49 74 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 IFI27L1Q96BM0 104 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 PRADC1Q9BSG0 188 aa5.44□□□□□ -1.54
SMC6-209ENST00000489535 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 SYS1-DBNDD2H3BUS1 97 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 ATP5G1P05496 136 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 G0S2P27469 103 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 UBE2D3P61077 147 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 UBE2D2P62837 147 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 COTL1Q14019 142 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 PET117Q6UWS5 81 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 C11orf68Q9H3H3 251 aaKnown RBP5.43□□□□□ -1.54
SMC6-209ENST00000489535 HHLA3Q9XRX5 114 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
SMC6-209ENST00000489535 A0A0J9YWU9 116 aa5.42□□□□□ -1.54
SMC6-209ENST00000489535 C20orf202A1L168 122 aa5.42□□□□□ -1.54
SMC6-209ENST00000489535 LINC01549A6NIU2 74 aa5.42□□□□□ -1.54
SMC6-209ENST00000489535 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.42□□□□□ -1.54
SMC6-209ENST00000489535 ATP5LO75964 103 aa5.42□□□□□ -1.54
SMC6-209ENST00000489535 HTN3P15516 51 aa5.42□□□□□ -1.54
SMC6-209ENST00000489535 CRYBA4P53673 196 aa5.42□□□□□ -1.54
SMC6-209ENST00000489535 RPL39P62891 51 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms