RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TRAV34A0A0B4J273 112 aa6.64□□□□□ -1.35
HDAC6-233ENST00000489352 ZNF861PO60384 105 aa6.64□□□□□ -1.35
HDAC6-233ENST00000489352 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-233ENST00000489352 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
HDAC6-233ENST00000489352 WDR61Q9GZS3 305 aaKnown RBP6.64□□□□□ -1.35
HDAC6-233ENST00000489352 EPDR1Q9UM22 224 aa6.64□□□□□ -1.35
HDAC6-233ENST00000489352 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-233ENST00000489352 SUMO1P63165 101 aaKnown RBP6.63□□□□□ -1.35
HDAC6-233ENST00000489352 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-233ENST00000489352 NHLH2Q02577 135 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 SPANXN1Q5VSR9 72 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 RNASEKQ6P5S7 137 aaKnown RBP6.63□□□□□ -1.35
HDAC6-233ENST00000489352 NUP35Q8NFH5 326 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 C11orf1Q9H5F2 150 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 ARL2-SNX15V9GYD0 113 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 USH2AO75445 5202 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
HDAC6-233ENST00000489352 CCL25O15444 150 aa6.62□□□□□ -1.35
HDAC6-233ENST00000489352 SH2D1AO60880 128 aa6.62□□□□□ -1.35
HDAC6-233ENST00000489352 MALP21145 153 aa6.62□□□□□ -1.35
HDAC6-233ENST00000489352 SSTP61278 116 aa6.62□□□□□ -1.35
HDAC6-233ENST00000489352 COTL1Q14019 142 aa6.62□□□□□ -1.35
HDAC6-233ENST00000489352 FCGBPQ9Y6R7 5405 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-233ENST00000489352 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
HDAC6-233ENST00000489352 INMT-MINDY4F8WBC2 141 aa6.61□□□□□ -1.35
HDAC6-233ENST00000489352 HMGB3O15347 200 aaKnown RBP6.61□□□□□ -1.35
HDAC6-233ENST00000489352 NDUFB6O95139 128 aa6.61□□□□□ -1.35
HDAC6-233ENST00000489352 BTCP35070 178 aa6.61□□□□□ -1.35
HDAC6-233ENST00000489352 NKX2-5P52952 324 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-233ENST00000489352 OPRPNQ99935 248 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-233ENST00000489352 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
HDAC6-233ENST00000489352 MED28Q9H204 178 aa6.61□□□□□ -1.35
HDAC6-233ENST00000489352 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 A0A1B0GVG6 124 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 C19orf71A6NCJ1 209 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 MGPP08493 103 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 OR10AG1Q8NH19 301 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 PGLYRP4Q96LB8 373 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
HDAC6-233ENST00000489352 M0QXV9 152 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 PFDN1O60925 122 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 CRIP1P50238 77 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 CTAG1AP78358 180 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 RAB32Q13637 225 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 SS18Q15532 418 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 LRRC37A5PQ49AS3 106 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 SCGB1C1Q8TD33 95 aa6.59□□□□□ -1.35
HDAC6-233ENST00000489352 MUC21A0A140T8X8 626 aa6.58□□□□□ -1.36
HDAC6-233ENST00000489352 ARL14EPLP0DKL9 152 aa6.58□□□□□ -1.36
HDAC6-233ENST00000489352 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
HDAC6-233ENST00000489352 LINC01559Q495D7 138 aa6.58□□□□□ -1.36
HDAC6-233ENST00000489352 AP1S3Q96PC3 154 aa6.58□□□□□ -1.36
HDAC6-233ENST00000489352 IMMP2LQ96T52 175 aa6.58□□□□□ -1.36
HDAC6-233ENST00000489352 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
HDAC6-233ENST00000489352 LINC00959A0A1B0GUT2 108 aa6.57□□□□□ -1.36
HDAC6-233ENST00000489352 M0QY20 66 aa6.57□□□□□ -1.36
HDAC6-233ENST00000489352 BCL2L11O43521 198 aa6.57□□□□□ -1.36
HDAC6-233ENST00000489352 FP248Q71RG6 208 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-233ENST00000489352 TMEM101Q96IK0 257 aa6.57□□□□□ -1.36
HDAC6-233ENST00000489352 BTF3L4Q96K17 158 aa6.57□□□□□ -1.36
HDAC6-233ENST00000489352 ALG5Q9Y673 324 aa6.57□□□□□ -1.36
HDAC6-233ENST00000489352 ESDP10768 282 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
HDAC6-233ENST00000489352 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 Q86TA4 180 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 FAM210AQ96ND0 272 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 ANAPC11Q9NYG5 84 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 ZFP30Q9Y2G7 519 aa6.56□□□□□ -1.36
HDAC6-233ENST00000489352 IGKV2D-26A0A0A0MRZ7 120 aa6.55□□□□□ -1.36
HDAC6-233ENST00000489352 RASL11AQ6T310 242 aa6.55□□□□□ -1.36
HDAC6-233ENST00000489352 COX7A2LO14548 114 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 SSNA1O43805 119 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 NUPR1O60356 82 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 GAGE2EQ4V326 116 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 AKAP14Q86UN6 197 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 OR2D3Q8NGH3 330 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 NIT2Q9NQR4 276 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 GAGE2DQ9UEU5 116 aa6.54□□□□□ -1.36
HDAC6-233ENST00000489352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-233ENST00000489352 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-233ENST00000489352 H7C423 109 aa6.53□□□□□ -1.36
HDAC6-233ENST00000489352 GCHFRP30047 84 aa6.53□□□□□ -1.36
HDAC6-233ENST00000489352 TMEM167BQ9NRX6 74 aa6.53□□□□□ -1.36
HDAC6-233ENST00000489352 ZNF25P17030 456 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-233ENST00000489352 CDC34P49427 236 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-233ENST00000489352 UBE2G1P62253 170 aa6.52□□□□□ -1.37
HDAC6-233ENST00000489352 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
HDAC6-233ENST00000489352 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.37
HDAC6-233ENST00000489352 CTDSP1Q9GZU7 261 aa6.52□□□□□ -1.37
HDAC6-233ENST00000489352 WFDC1Q9HC57 220 aa6.52□□□□□ -1.37
HDAC6-233ENST00000489352 PEX7O00628 323 aa6.51□□□□□ -1.37
HDAC6-233ENST00000489352 OR5AL1P0C617 328 aa6.51□□□□□ -1.37
HDAC6-233ENST00000489352 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
HDAC6-233ENST00000489352 SNAI2O43623 268 aa6.5□□□□□ -1.37
HDAC6-233ENST00000489352 APCSP02743 223 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms