RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 STARD9Q9P2P6 4700 aa7.45□□□□□ -1.22
USP11-209ENST00000488848 HBDP02042 147 aa7.45□□□□□ -1.22
USP11-209ENST00000488848 RNASEKQ6P5S7 137 aaKnown RBP7.45□□□□□ -1.22
USP11-209ENST00000488848 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
USP11-209ENST00000488848 TMEM18Q96B42 140 aa7.45□□□□□ -1.22
USP11-209ENST00000488848 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 LOC389332A0A1B0GUA5 103 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 F5H768 121 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 H7C423 109 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 GYPEP15421 78 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 NANOS2P60321 138 aaKnown RBP7.44□□□□□ -1.22
USP11-209ENST00000488848 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
USP11-209ENST00000488848 C20orf203Q8NBC4 194 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
USP11-209ENST00000488848 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 A0A096LPF7 62 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 AMTP48728 403 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 GAGE1Q13065 139 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 GAGE4Q13068 117 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 GAGE5Q13069 117 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 COTL1Q14019 142 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 GAGE13Q4V321 117 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 MRPL52Q86TS9 123 aaKnown RBP7.43□□□□□ -1.22
USP11-209ENST00000488848 C15orf53Q8NAA6 179 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 TIMM17AQ99595 171 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 TIMM21Q9BVV7 248 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
USP11-209ENST00000488848 ICOSQ9Y6W8 199 aa7.43□□□□□ -1.22
USP11-209ENST00000488848 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
USP11-209ENST00000488848 SPATA12Q7Z6I5 190 aa7.42□□□□□ -1.22
USP11-209ENST00000488848 ATP6V0E2Q8NHE4 81 aa7.42□□□□□ -1.22
USP11-209ENST00000488848 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
USP11-209ENST00000488848 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 LOC105371267A0A1B0GV96 52 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 IGIPA6NJ69 53 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 S100A2P29034 98 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 C2orf66Q6UXQ4 117 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 NEGR1Q7Z3B1 354 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 DNAH1Q9P2D7 4330 aa7.41□□□□□ -1.22
USP11-209ENST00000488848 ATP5LO75964 103 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 NUDT3O95989 172 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 TCTAP57738 103 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 ERASQ7Z444 233 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 SPANXA1Q9NS26 97 aa7.4□□□□□ -1.22
USP11-209ENST00000488848 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
USP11-209ENST00000488848 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
USP11-209ENST00000488848 PKIAP61925 76 aa7.39□□□□□ -1.23
USP11-209ENST00000488848 MRPS36P82909 103 aaKnown RBP7.39□□□□□ -1.23
USP11-209ENST00000488848 LELP1Q5T871 98 aa7.39□□□□□ -1.23
USP11-209ENST00000488848 PHLDA1Q8WV24 401 aaPredicted RBP7.39□□□□□ -1.23
USP11-209ENST00000488848 LYSTQ99698 3801 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 TRAV12-1A0A0B4J245 112 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 A0A0J9YY99 117 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 A0A1B0GUV1 79 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 FABP4P15090 132 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 FAM104AQ969W3 186 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 UBE2D4Q9Y2X8 147 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
USP11-209ENST00000488848 IGHV3-38A0A0C4DH36 116 aa7.37□□□□□ -1.23
USP11-209ENST00000488848 HTN3P15516 51 aa7.37□□□□□ -1.23
USP11-209ENST00000488848 AKR1D1P51857 326 aa7.37□□□□□ -1.23
USP11-209ENST00000488848 PMCHL1Q16048 86 aa7.37□□□□□ -1.23
USP11-209ENST00000488848 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
USP11-209ENST00000488848 CEMP1Q6PRD7 247 aaPredicted RBP7.37□□□□□ -1.23
USP11-209ENST00000488848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.36□□□□□ -1.23
USP11-209ENST00000488848 BTF3P20290 206 aaKnown RBP7.36□□□□□ -1.23
USP11-209ENST00000488848 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
USP11-209ENST00000488848 LYPD5Q6UWN5 251 aa7.36□□□□□ -1.23
USP11-209ENST00000488848 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
USP11-209ENST00000488848 IFI27L1Q96BM0 104 aa7.36□□□□□ -1.23
USP11-209ENST00000488848 AMELXQ99217 191 aa7.36□□□□□ -1.23
USP11-209ENST00000488848 UPK3BQ9BT76 320 aa7.36□□□□□ -1.23
USP11-209ENST00000488848 ALMS1Q8TCU4 4167 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 IGLV4-3A0A075B6K6 122 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 SYS1-DBNDD2H3BUS1 97 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 C3orf79P0CE67 100 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 LINC01545Q5VT33 79 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 LGALS9CQ6DKI2 356 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 LINC00173Q6ZV60 143 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 FAM19A3Q7Z5A8 133 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 MAP1LC3CQ9BXW4 147 aa7.35□□□□□ -1.23
USP11-209ENST00000488848 FGF6P10767 208 aa7.34□□□□□ -1.23
USP11-209ENST00000488848 JOSD1Q15040 202 aaPredicted RBP7.34□□□□□ -1.23
USP11-209ENST00000488848 Q8N976 141 aa7.34□□□□□ -1.23
USP11-209ENST00000488848 OR10D4PQ8NGN7 298 aa7.34□□□□□ -1.23
USP11-209ENST00000488848 BAALCQ8WXS3 180 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms