RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 KTN1Q86UP2 1357 aaKnown RBP1.63□□□□□ -2.15
HFM1-208ENST00000488023 IQGAP3Q86VI3 1631 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 TRAV30A0A087WSZ9 112 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 TMEM30CPA0ZSE6 113 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 NUPR1O60356 82 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 SPINK8P0C7L1 97 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 PIPP12273 146 aaPredicted RBP1.63□□□□□ -2.15
HFM1-208ENST00000488023 RBM3P98179 157 aaKnown RBP1.63□□□□□ -2.15
HFM1-208ENST00000488023 INSL4Q14641 139 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 C8orf59Q8N0T1 100 aaPredicted RBP1.63□□□□□ -2.15
HFM1-208ENST00000488023 LINC00526Q96FQ7 95 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 WFDC10AQ9H1F0 79 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 RPRMQ9NS64 109 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 PTPRFP10586 1907 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 EPG5Q9HCE0 2579 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 VPS8Q8N3P4 1428 aa1.63□□□□□ -2.15
HFM1-208ENST00000488023 PTPRZ1P23471 2315 aaPredicted RBP1.62□□□□□ -2.15
HFM1-208ENST00000488023 SZT2Q5T011 3432 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 CEP290O15078 2479 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 DOPEY1Q5JWR5 2465 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 FLNBO75369 2602 aaKnown RBP1.62□□□□□ -2.15
HFM1-208ENST00000488023 CXorf51AA0A1B0GTR3 108 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 M0R143 59 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 IFNA17P01571 189 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 IGLV3-1P01715 115 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 IFITM1P13164 125 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 S100A10P60903 97 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 DEFB103AP81534 67 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 SVBPQ8N300 66 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 ACBD7Q8N6N7 88 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 Q8N8P6 123 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 TMEM141Q96I45 108 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 UBR3Q6ZT12 1888 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 ALPK2Q86TB3 2170 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 CR1P17927 2039 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 UNC80Q8N2C7 3258 aa1.62□□□□□ -2.15
HFM1-208ENST00000488023 A0A0G2JMZ2 1700 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 ANKRD11Q6UB99 2663 aaPredicted RBP1.61□□□□□ -2.15
HFM1-208ENST00000488023 TRGV2A0A075B6R0 118 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 TRAV2A0A0B4J234 112 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 JMJD7-PLA2G4BH0Y9G9 81 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 IL9P15248 144 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 NPC2P61916 151 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 MPV17LQ2QL34 196 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 SLC48A1Q6P1K1 146 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 PPDPFLQ8WWR9 84 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 MRPL36Q9P0J6 103 aaKnown RBP1.61□□□□□ -2.15
HFM1-208ENST00000488023 MYOFQ9NZM1 2061 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 BCORQ6W2J9 1755 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 GBF1Q92538 1859 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 CRYBG1Q9Y4K1 1723 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 ASH1LQ9NR48 2969 aaKnown RBP1.61□□□□□ -2.15
HFM1-208ENST00000488023 ACACBO00763 2458 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 RGPD8O14715 1765 aaPredicted RBP1.61□□□□□ -2.15
HFM1-208ENST00000488023 RGPD5Q99666 1765 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 DLEC1Q9Y238 1755 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 TRAV23DV6A0A075B6W5 121 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 A0A0J9YY99 117 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 NUPR2A6NF83 97 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 SPTSSBQ8NFR3 76 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 C10orf82Q8WW14 230 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 ODF3Q96PU9 254 aa1.61□□□□□ -2.15
HFM1-208ENST00000488023 TPRP12270 2363 aaKnown RBP1.61□□□□□ -2.15
HFM1-208ENST00000488023 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
HFM1-208ENST00000488023 SPTBN5Q9NRC6 3674 aaKnown RBP1.6□□□□□ -2.15
HFM1-208ENST00000488023 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
HFM1-208ENST00000488023 HCRTO43612 131 aa1.6□□□□□ -2.15
HFM1-208ENST00000488023 GYPBP06028 91 aa1.6□□□□□ -2.15
HFM1-208ENST00000488023 C9orf116Q5BN46 136 aaPredicted RBP1.6□□□□□ -2.15
HFM1-208ENST00000488023 RPL7L1Q6DKI1 246 aaKnown RBP1.6□□□□□ -2.15
HFM1-208ENST00000488023 LINC00299Q6ZSB3 139 aa1.6□□□□□ -2.15
HFM1-208ENST00000488023 IFI27L1Q96BM0 104 aa1.6□□□□□ -2.15
HFM1-208ENST00000488023 NCOR1O75376 2440 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 TRANK1O15050 2925 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 DOT1LQ8TEK3 1739 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 IFT172Q9UG01 1749 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 TCRBV3S1A0A5B6 114 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 MPC2O95563 127 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 PRB1P04280 392 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 PKIAP61925 76 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 ATG5Q9H1Y0 275 aa1.59□□□□□ -2.15
HFM1-208ENST00000488023 ANKRD17O75179 2603 aaKnown RBP1.59□□□□□ -2.15
HFM1-208ENST00000488023 MAP1BP46821 2468 aaKnown RBP1.59□□□□□ -2.16
HFM1-208ENST00000488023 MCM3APO60318 1980 aa1.59□□□□□ -2.16
HFM1-208ENST00000488023 TNRC6AQ8NDV7 1962 aaKnown RBP1.59□□□□□ -2.16
HFM1-208ENST00000488023 CEP162Q5TB80 1403 aa1.59□□□□□ -2.16
HFM1-208ENST00000488023 CITO14578 2027 aa1.59□□□□□ -2.16
HFM1-208ENST00000488023 PPLO60437 1756 aa1.59□□□□□ -2.16
HFM1-208ENST00000488023 NINQ8N4C6 2090 aa1.59□□□□□ -2.16
HFM1-208ENST00000488023 C2CD3Q4AC94 2353 aa1.59□□□□□ -2.16
HFM1-208ENST00000488023 GCN1Q92616 2671 aaKnown RBP1.59□□□□□ -2.16
HFM1-208ENST00000488023 CHD6Q8TD26 2715 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 TRBV10-1A0A0K0K1A3 114 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 A6NIN4 97 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 MRPS14O60783 128 aaKnown RBP1.58□□□□□ -2.16
HFM1-208ENST00000488023 PDE6GP18545 87 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 CBLN1P23435 193 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 PCOTHQ58A44 107 aa1.58□□□□□ -2.16
HFM1-208ENST00000488023 MRPL35Q9NZE8 188 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms