RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NDUFB6O95139 128 aa4.74□□□□□ -1.65
XRN1-212ENST00000486211 FGF6P10767 208 aa4.74□□□□□ -1.65
XRN1-212ENST00000486211 TMBIM6P55061 237 aa4.74□□□□□ -1.65
XRN1-212ENST00000486211 MEF2BQ02080 365 aaPredicted RBP4.74□□□□□ -1.65
XRN1-212ENST00000486211 IL15RAQ13261 267 aa4.74□□□□□ -1.65
XRN1-212ENST00000486211 DEDD2Q8WXF8 326 aa4.74□□□□□ -1.65
XRN1-212ENST00000486211 MRPS26Q9BYN8 205 aaKnown RBP4.74□□□□□ -1.65
XRN1-212ENST00000486211 IGHV1-58A0A0C4DH39 117 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 K7EQM0 130 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 PVALBP20472 110 aaPredicted RBP4.73□□□□□ -1.65
XRN1-212ENST00000486211 SPCS2Q15005 226 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 PQLC2Q6ZP29 291 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 MED28Q9H204 178 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 PPDPFQ9H3Y8 114 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 ARL2-SNX15V9GYD0 113 aa4.73□□□□□ -1.65
XRN1-212ENST00000486211 TRAV34A0A0B4J273 112 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 SH2D1AO60880 128 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 APOMO95445 188 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 CAMPP49913 170 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 LINC00173Q6ZV60 143 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 NUP35Q8NFH5 326 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 OR10AG1Q8NH19 301 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 TYMSOSQ8TAI1 123 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 ZNF471Q9BX82 626 aaPredicted RBP4.72□□□□□ -1.65
XRN1-212ENST00000486211 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
XRN1-212ENST00000486211 TMSB15BA0A087X1C1 80 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 FAM168BA1KXE4 195 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 FAM25EA8MYX2 175 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 C17orf112F2Z3M2 114 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 F5H697 171 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 RPL12P30050 165 aaKnown RBP4.71□□□□□ -1.66
XRN1-212ENST00000486211 COX8CQ7Z4L0 72 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 KRTAP7-1Q8IUC3 87 aa4.71□□□□□ -1.66
XRN1-212ENST00000486211 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 M0QY20 66 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
XRN1-212ENST00000486211 TRIAP1O43715 76 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 ARL14EPLP0DKL9 152 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 XCL1P47992 114 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 RPL18AQ02543 176 aaKnown RBP4.7□□□□□ -1.66
XRN1-212ENST00000486211 KRTAP13-2Q52LG2 175 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 Q86TA4 180 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 TSKUQ8WUA8 353 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 RBM38Q9H0Z9 239 aaKnown RBP4.7□□□□□ -1.66
XRN1-212ENST00000486211 V9GYH0 126 aa4.7□□□□□ -1.66
XRN1-212ENST00000486211 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 UBE2L6O14933 153 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 ZNF861PO60384 105 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 BTCP35070 178 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
XRN1-212ENST00000486211 KRTAP13-3Q3SY46 172 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 PYDC2Q56P42 97 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 SUMO4Q6EEV6 95 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 ISOC2Q96AB3 205 aa4.69□□□□□ -1.66
XRN1-212ENST00000486211 CCL25O15444 150 aa4.68□□□□□ -1.66
XRN1-212ENST00000486211 TSHBP01222 138 aa4.68□□□□□ -1.66
XRN1-212ENST00000486211 NKX2-5P52952 324 aaPredicted RBP4.68□□□□□ -1.66
XRN1-212ENST00000486211 EIF5AL1Q6IS14 154 aaKnown RBP4.68□□□□□ -1.66
XRN1-212ENST00000486211 OR5A1Q8NGJ0 315 aa4.68□□□□□ -1.66
XRN1-212ENST00000486211 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
XRN1-212ENST00000486211 MUC21A0A140T8X8 626 aa4.67□□□□□ -1.66
XRN1-212ENST00000486211 H3BMQ9 156 aa4.67□□□□□ -1.66
XRN1-212ENST00000486211 SNAI2O43623 268 aa4.67□□□□□ -1.66
XRN1-212ENST00000486211 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
XRN1-212ENST00000486211 FAM19A5Q7Z5A7 132 aaPredicted RBP4.67□□□□□ -1.66
XRN1-212ENST00000486211 LINC00304Q8N9R0 145 aa4.67□□□□□ -1.66
XRN1-212ENST00000486211 OPRPNQ99935 248 aaPredicted RBP4.67□□□□□ -1.66
XRN1-212ENST00000486211 LINC00959A0A1B0GUT2 108 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 A0A1W2PPV4 95 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 NAP1L6A6NFF2 107 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 SCGB1D1O95968 90 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 STAG3L2P0CL84 134 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 STAG3L3P0CL85 134 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 GCHFRP30047 84 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 DEFA3P59666 94 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 CAMK2N2Q96S95 79 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 ANAPC11Q9NYG5 84 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 USH2AO75445 5202 aa4.66□□□□□ -1.66
XRN1-212ENST00000486211 H0YIZ8 118 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 BCL2L11O43521 198 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 ATP6V1G2O95670 118 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 CXCL1P09341 107 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 OR5AL1P0C617 328 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 UBE2BP63146 152 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 CTAG1AP78358 180 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 COTL1Q14019 142 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 CD164L2Q6UWJ8 174 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 LINC00337Q8N6G1 96 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 C2orf48Q96LS8 159 aa4.65□□□□□ -1.67
XRN1-212ENST00000486211 C19orf71A6NCJ1 209 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 M0QXV9 152 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 PEX7O00628 323 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 SMIM17P0DL12 118 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 ESDP10768 282 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 LINC00242Q5T6M2 205 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 SPANXN1Q5VSR9 72 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 AMMECR1LQ6DCA0 310 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 AP1S3Q96PC3 154 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 SEC22CQ9BRL7 303 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms