RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 LHFPL6Q9Y693 200 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 HCFC1P51610 2035 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 NUP214P35658 2090 aaPredicted RBP3.01□□□□□ -1.93
RTN4-213ENST00000485749 IGKV3D-11A0A0A0MRZ8 115 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 MYMXA0A1B0GTQ4 84 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 CEBPZOSA8MTT3 80 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 LINC01565O15544 149 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 PPYP01298 95 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 IGLV3-1P01715 115 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 PLGLAQ15195 96 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 DEFB110Q30KQ9 67 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 DEFB121Q5J5C9 76 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 LYPD5Q6UWN5 251 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 NTM-AS1Q6ZSK4 140 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 ZNF826PQ6ZT77 177 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 FAM223AQ8IWN6 122 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 Q8N6K4 173 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 Q8NDZ9 215 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 C1orf64Q8NEQ6 169 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 TMEM254Q8TBM7 123 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 IFI27L1Q96BM0 104 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 FAM167A-AS1Q96KT0 104 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 LIMD2Q9BT23 127 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 CASP8AP2Q9UKL3 1982 aa3.01□□□□□ -1.93
RTN4-213ENST00000485749 ATG2BQ96BY7 2078 aa3□□□□□ -1.93
RTN4-213ENST00000485749 A0A0J9YWU9 116 aa3□□□□□ -1.93
RTN4-213ENST00000485749 ZNF815PA8K554 130 aa3□□□□□ -1.93
RTN4-213ENST00000485749 IQCF6A8MYZ5 107 aa3□□□□□ -1.93
RTN4-213ENST00000485749 C16orf90A8MZG2 172 aa3□□□□□ -1.93
RTN4-213ENST00000485749 M0R135 149 aa3□□□□□ -1.93
RTN4-213ENST00000485749 GAS8-AS1O95177 125 aa3□□□□□ -1.93
RTN4-213ENST00000485749 DEFA4P12838 97 aa3□□□□□ -1.93
RTN4-213ENST00000485749 UBE2D3P61077 147 aa3□□□□□ -1.93
RTN4-213ENST00000485749 UBE2D2P62837 147 aa3□□□□□ -1.93
RTN4-213ENST00000485749 Q1RN00 199 aa3□□□□□ -1.93
RTN4-213ENST00000485749 C15orf32Q32M92 178 aa3□□□□□ -1.93
RTN4-213ENST00000485749 Q6ZQT0 140 aa3□□□□□ -1.93
RTN4-213ENST00000485749 Q6ZS52 159 aa3□□□□□ -1.93
RTN4-213ENST00000485749 C20orf197Q8N268 126 aa3□□□□□ -1.93
RTN4-213ENST00000485749 MUC7Q8TAX7 377 aa3□□□□□ -1.93
RTN4-213ENST00000485749 TXNDC17Q9BRA2 123 aa3□□□□□ -1.93
RTN4-213ENST00000485749 DEFB126Q9BYW3 111 aa3□□□□□ -1.93
RTN4-213ENST00000485749 OBSL1O75147 1896 aa3□□□□□ -1.93
RTN4-213ENST00000485749 MUC22E2RYF6 1773 aaPredicted RBP3□□□□□ -1.93
RTN4-213ENST00000485749 KIAA1549LQ6ZVL6 1849 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 TRBV7-3A0A075B6L6 115 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 TRBV25-1A0A075B6N4 114 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 IGLV3-32A0A0A0MS00 114 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 CTXND1A0A1B0GTU2 59 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 B4DSR2 109 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 MDKP21741 143 aaPredicted RBP2.99□□□□□ -1.93
RTN4-213ENST00000485749 HIGD2BQ4VC39 106 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 C10orf128Q5T292 105 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 ATP5EP2Q5VTU8 51 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 KLHL30-AS1Q8NEE0 82 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 LINC00574Q9H8X3 128 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 PSENENQ9NZ42 101 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 MYO10Q9HD67 2058 aa2.99□□□□□ -1.93
RTN4-213ENST00000485749 RAI1Q7Z5J4 1906 aaPredicted RBP2.98□□□□□ -1.93
RTN4-213ENST00000485749 SPTY2D1-AS1A0A0U1RR47 76 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 F8WEM9 126 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 CHKB-CPT1BH3BT56 60 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 ERC2-IT1O76042 136 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 BAALC-AS2P0C853 105 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 DNAH10OSP0CZ25 163 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 IFI27P40305 119 aaPredicted RBP2.98□□□□□ -1.93
RTN4-213ENST00000485749 FAM229BQ4G0N7 80 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 SFTA2Q6UW10 78 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 PATE1Q8WXA2 126 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 EP400Q96L91 3159 aa2.98□□□□□ -1.93
RTN4-213ENST00000485749 MDC1Q14676 2089 aaKnown RBP2.97□□□□□ -1.93
RTN4-213ENST00000485749 TRAV23DV6A0A075B6W5 121 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 TRBV6-6A0A0A6YYG2 114 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 TMEM30CPA0ZSE6 113 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 C17orf98A8MV24 154 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 E7EUB6 86 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 MIFP14174 115 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 ATXN8Q156A1 80 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 PIGYQ3MUY2 71 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 Q6JHZ5 121 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 C2orf82Q6UX34 121 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 TP53TG3Q9ULZ0 132 aa2.97□□□□□ -1.93
RTN4-213ENST00000485749 EML6Q6ZMW3 1958 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 DSCAML1Q8TD84 2053 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 TICRRQ7Z2Z1 1910 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 IGLV10-54A0A075B6I4 117 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 IGKV1OR2-108A0A075B7D4 117 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 A0A087WYN8 130 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 TMSB15BA0A087X1C1 80 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 SDHAF1A6NFY7 115 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 C11orf86A6NJI1 115 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 IGLV3-19P01714 112 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 P0C879 139 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 ZNF22P17026 224 aaPredicted RBP2.96□□□□□ -1.94
RTN4-213ENST00000485749 FAM215AQ9Y5M1 114 aa2.96□□□□□ -1.94
RTN4-213ENST00000485749 IGKV1D-37A0A075B6S9 117 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 TRAV10A0A0B4J240 114 aa2.95□□□□□ -1.94
RTN4-213ENST00000485749 IGHV1-18A0A0C4DH31 117 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms