RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NBDYA0A0U1RRE5 68 aa12.14□□□□□ -0.47
CPNE1-224ENST00000483359 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
CPNE1-224ENST00000483359 COX19Q49B96 90 aa12.14□□□□□ -0.47
CPNE1-224ENST00000483359 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
CPNE1-224ENST00000483359 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
CPNE1-224ENST00000483359 MT-ND6P03923 174 aa12.13□□□□□ -0.47
CPNE1-224ENST00000483359 AMTP48728 403 aa12.13□□□□□ -0.47
CPNE1-224ENST00000483359 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 C20orf78Q9BR46 151 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 TRBV27A0A0K0K1C4 114 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 TSHBP01222 138 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 GAGE6Q13070 117 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 IQCJQ1A5X6 159 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 NIT1Q86X76 327 aa12.12□□□□□ -0.47
CPNE1-224ENST00000483359 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
CPNE1-224ENST00000483359 VCYO14598 125 aa12.11□□□□□ -0.47
CPNE1-224ENST00000483359 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
CPNE1-224ENST00000483359 PHOX2AO14813 284 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 TMEM243Q9BU79 118 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 A0A087WX48 190 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 FCER1GP30273 86 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 TTC32Q5I0X7 151 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 KIR2DL4Q99706 377 aa12.1□□□□□ -0.47
CPNE1-224ENST00000483359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-224ENST00000483359 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-224ENST00000483359 Q6ZR54 194 aa12.09□□□□□ -0.47
CPNE1-224ENST00000483359 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
CPNE1-224ENST00000483359 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
CPNE1-224ENST00000483359 UBE2L6O14933 153 aa12.09□□□□□ -0.47
CPNE1-224ENST00000483359 Q8N976 141 aa12.09□□□□□ -0.47
CPNE1-224ENST00000483359 TCAPO15273 167 aa12.08□□□□□ -0.48
CPNE1-224ENST00000483359 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
CPNE1-224ENST00000483359 S100A12P80511 92 aa12.07□□□□□ -0.48
CPNE1-224ENST00000483359 TRAV9-2A0A087WT02 112 aa12.07□□□□□ -0.48
CPNE1-224ENST00000483359 LINC00518Q8N0U6 118 aa12.07□□□□□ -0.48
CPNE1-224ENST00000483359 ALKBH7Q9BT30 221 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-224ENST00000483359 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
CPNE1-224ENST00000483359 KLK12Q9UKR0 248 aa12.05□□□□□ -0.48
CPNE1-224ENST00000483359 COLCA2A8K830 154 aa12.05□□□□□ -0.48
CPNE1-224ENST00000483359 RBX1P62877 108 aa12.05□□□□□ -0.48
CPNE1-224ENST00000483359 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
CPNE1-224ENST00000483359 DNAH10Q8IVF4 4471 aa12.04□□□□□ -0.48
CPNE1-224ENST00000483359 ANGP03950 147 aaKnown RBP12.04□□□□□ -0.48
CPNE1-224ENST00000483359 IFI27P40305 119 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-224ENST00000483359 Q9HAA7 133 aa12.04□□□□□ -0.48
CPNE1-224ENST00000483359 ESDP10768 282 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 RAB5AP20339 215 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
CPNE1-224ENST00000483359 PCP4L1A6NKN8 68 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 PRSS47A8MTI9 375 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 CLPSL2Q6UWE3 100 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 Q8N8P6 123 aa12.03□□□□□ -0.48
CPNE1-224ENST00000483359 IGLV4-60A0A075B6I1 120 aa12.02□□□□□ -0.49
CPNE1-224ENST00000483359 FGF6P10767 208 aa12.02□□□□□ -0.49
CPNE1-224ENST00000483359 PKIAP61925 76 aa12.02□□□□□ -0.49
CPNE1-224ENST00000483359 C1orf134Q5TEV5 83 aa12.02□□□□□ -0.49
CPNE1-224ENST00000483359 C6orf223Q8N319 242 aa12.02□□□□□ -0.49
CPNE1-224ENST00000483359 K7EP13 123 aa12.01□□□□□ -0.49
CPNE1-224ENST00000483359 TRGC2P03986 189 aa12.01□□□□□ -0.49
CPNE1-224ENST00000483359 IBA57-AS1B1ANH7 110 aa12.01□□□□□ -0.49
CPNE1-224ENST00000483359 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
CPNE1-224ENST00000483359 UBE2WQ96B02 151 aa12.01□□□□□ -0.49
CPNE1-224ENST00000483359 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
CPNE1-224ENST00000483359 NXT2Q9NPJ8 142 aaKnown RBP12□□□□□ -0.49
CPNE1-224ENST00000483359 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
CPNE1-224ENST00000483359 C20orf203Q8NBC4 194 aa11.99□□□□□ -0.49
CPNE1-224ENST00000483359 FRAS1Q86XX4 4008 aa11.99□□□□□ -0.49
CPNE1-224ENST00000483359 CRPP02741 224 aa11.99□□□□□ -0.49
CPNE1-224ENST00000483359 C18orf32Q8TCD1 76 aa11.99□□□□□ -0.49
CPNE1-224ENST00000483359 H7C423 109 aa11.98□□□□□ -0.49
CPNE1-224ENST00000483359 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
CPNE1-224ENST00000483359 RTL8CO15255 209 aa11.98□□□□□ -0.49
CPNE1-224ENST00000483359 LAGE3Q14657 143 aa11.98□□□□□ -0.49
CPNE1-224ENST00000483359 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
CPNE1-224ENST00000483359 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
CPNE1-224ENST00000483359 ORMDL2Q53FV1 153 aa11.96□□□□□ -0.49
CPNE1-224ENST00000483359 ENHOQ6UWT2 76 aa11.96□□□□□ -0.49
CPNE1-224ENST00000483359 FA2HQ7L5A8 372 aa11.96□□□□□ -0.49
CPNE1-224ENST00000483359 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
CPNE1-224ENST00000483359 TMEM18Q96B42 140 aa11.96□□□□□ -0.49
CPNE1-224ENST00000483359 TMEM101Q96IK0 257 aa11.96□□□□□ -0.49
CPNE1-224ENST00000483359 BTF3P20290 206 aaKnown RBP11.96□□□□□ -0.5
CPNE1-224ENST00000483359 REG3AQ06141 175 aa11.96□□□□□ -0.5
CPNE1-224ENST00000483359 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.5
CPNE1-224ENST00000483359 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.5
CPNE1-224ENST00000483359 TRAV8-3A0A0A6YYJ7 113 aa11.95□□□□□ -0.5
CPNE1-224ENST00000483359 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-224ENST00000483359 RNASE13Q5GAN3 156 aaKnown RBP11.95□□□□□ -0.5
CPNE1-224ENST00000483359 MRPL52Q86TS9 123 aaKnown RBP11.95□□□□□ -0.5
CPNE1-224ENST00000483359 FAT2Q9NYQ8 4349 aa11.94□□□□□ -0.5
CPNE1-224ENST00000483359 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
CPNE1-224ENST00000483359 S100A6P06703 90 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms