RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 KRTAP26-1Q6PEX3 210 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 GATD1Q8NB37 220 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 CHAC1Q9BUX1 264 aa9.13□□□□□ -0.95
SHANK1-207ENST00000483128 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
SHANK1-207ENST00000483128 UBE2L6O14933 153 aa9.12□□□□□ -0.95
SHANK1-207ENST00000483128 COTL1Q14019 142 aa9.12□□□□□ -0.95
SHANK1-207ENST00000483128 LYPD6BQ8NI32 183 aa9.12□□□□□ -0.95
SHANK1-207ENST00000483128 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SHANK1-207ENST00000483128 EIF5A2Q9GZV4 153 aaKnown RBP9.12□□□□□ -0.95
SHANK1-207ENST00000483128 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
SHANK1-207ENST00000483128 AMTP48728 403 aa9.11□□□□□ -0.95
SHANK1-207ENST00000483128 SMIM15Q7Z3B0 74 aa9.11□□□□□ -0.95
SHANK1-207ENST00000483128 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
SHANK1-207ENST00000483128 RPL39LQ96EH5 51 aaKnown RBP9.11□□□□□ -0.95
SHANK1-207ENST00000483128 HERC1Q15751 4861 aa9.1□□□□□ -0.95
SHANK1-207ENST00000483128 A0A1B0GUV1 79 aa9.1□□□□□ -0.95
SHANK1-207ENST00000483128 A0A1B0GVG6 124 aa9.1□□□□□ -0.95
SHANK1-207ENST00000483128 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
SHANK1-207ENST00000483128 A8MWL6 223 aa9.09□□□□□ -0.95
SHANK1-207ENST00000483128 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
SHANK1-207ENST00000483128 SMIM7Q9BQ49 75 aa9.09□□□□□ -0.95
SHANK1-207ENST00000483128 TRAV8-4A0A0B4J246 113 aa9.08□□□□□ -0.96
SHANK1-207ENST00000483128 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
SHANK1-207ENST00000483128 hDV102S1A0JD36 115 aa9.07□□□□□ -0.96
SHANK1-207ENST00000483128 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
SHANK1-207ENST00000483128 FAM210AQ96ND0 272 aa9.07□□□□□ -0.96
SHANK1-207ENST00000483128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
SHANK1-207ENST00000483128 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
SHANK1-207ENST00000483128 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
SHANK1-207ENST00000483128 CT83Q5H943 113 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 AMMECR1LQ6DCA0 310 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 CLRN3Q8NCR9 226 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
SHANK1-207ENST00000483128 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
SHANK1-207ENST00000483128 J3QL48 77 aa9.05□□□□□ -0.96
SHANK1-207ENST00000483128 APCSP02743 223 aa9.05□□□□□ -0.96
SHANK1-207ENST00000483128 RNASEKQ6P5S7 137 aaKnown RBP9.05□□□□□ -0.96
SHANK1-207ENST00000483128 TEX261Q6UWH6 196 aa9.05□□□□□ -0.96
SHANK1-207ENST00000483128 A0A1B0GUT8 65 aa9.04□□□□□ -0.96
SHANK1-207ENST00000483128 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
SHANK1-207ENST00000483128 NCR2O95944 276 aa9.04□□□□□ -0.96
SHANK1-207ENST00000483128 PMCHP20382 165 aa9.04□□□□□ -0.96
SHANK1-207ENST00000483128 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
SHANK1-207ENST00000483128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.04□□□□□ -0.96
SHANK1-207ENST00000483128 PANO1I0J062 215 aa9.03□□□□□ -0.96
SHANK1-207ENST00000483128 I3L3M4 83 aa9.03□□□□□ -0.96
SHANK1-207ENST00000483128 SDIM1Q6ZPB5 146 aa9.03□□□□□ -0.96
SHANK1-207ENST00000483128 OSTCQ9NRP0 149 aa9.03□□□□□ -0.96
SHANK1-207ENST00000483128 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
SHANK1-207ENST00000483128 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
SHANK1-207ENST00000483128 SLPIP03973 132 aa9.02□□□□□ -0.97
SHANK1-207ENST00000483128 FGF6P10767 208 aa9.02□□□□□ -0.97
SHANK1-207ENST00000483128 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
SHANK1-207ENST00000483128 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.97
SHANK1-207ENST00000483128 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
SHANK1-207ENST00000483128 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
SHANK1-207ENST00000483128 TRBV6-5A0A0K0K1A5 114 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 H7C423 109 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 NDUFS6O75380 124 aaKnown RBP9.01□□□□□ -0.97
SHANK1-207ENST00000483128 RAB4AP20338 218 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 RPS10P46783 165 aaKnown RBP9.01□□□□□ -0.97
SHANK1-207ENST00000483128 AMN1Q8IY45 258 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 CHCHD10Q8WYQ3 142 aaPredicted RBP9.01□□□□□ -0.97
SHANK1-207ENST00000483128 RNF185Q96GF1 192 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 TMEM242Q9NWH2 141 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 V9GYV3 84 aa9.01□□□□□ -0.97
SHANK1-207ENST00000483128 TRAV16A0A0A6YYK6 109 aaPredicted RBP9□□□□□ -0.97
SHANK1-207ENST00000483128 TMEM241Q24JQ0 296 aa9□□□□□ -0.97
SHANK1-207ENST00000483128 C15orf56Q8N910 161 aa9□□□□□ -0.97
SHANK1-207ENST00000483128 NUP35Q8NFH5 326 aa9□□□□□ -0.97
SHANK1-207ENST00000483128 DPH3Q96FX2 82 aa9□□□□□ -0.97
SHANK1-207ENST00000483128 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 C9JQL5 133 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 SMKR1H3BMG3 65 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 TSHBP01222 138 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 RPL37AP61513 92 aaKnown RBP8.99□□□□□ -0.97
SHANK1-207ENST00000483128 RPL23P62829 140 aaKnown RBP8.99□□□□□ -0.97
SHANK1-207ENST00000483128 RIGQ13278 110 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 ADIRFQ15847 76 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 HIGD2BQ4VC39 106 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 ISOC2Q96AB3 205 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
SHANK1-207ENST00000483128 KRTAP29-1A8MX34 341 aaPredicted RBP8.98□□□□□ -0.97
SHANK1-207ENST00000483128 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
SHANK1-207ENST00000483128 ESDP10768 282 aa8.98□□□□□ -0.97
SHANK1-207ENST00000483128 SRSF3P84103 164 aaKnown RBP8.98□□□□□ -0.97
SHANK1-207ENST00000483128 FAM74A3Q4VXF1 159 aa8.98□□□□□ -0.97
SHANK1-207ENST00000483128 MRAP2Q96G30 205 aa8.98□□□□□ -0.97
SHANK1-207ENST00000483128 TMEM101Q96IK0 257 aa8.98□□□□□ -0.97
SHANK1-207ENST00000483128 ZNF25P17030 456 aaPredicted RBP8.97□□□□□ -0.97
SHANK1-207ENST00000483128 XCL1P47992 114 aa8.97□□□□□ -0.97
SHANK1-207ENST00000483128 POLR2KP53803 58 aaKnown RBP8.97□□□□□ -0.97
SHANK1-207ENST00000483128 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
SHANK1-207ENST00000483128 FOXI1Q12951 378 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms