RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TCF24Q7RTU0 167 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 SCXQ7RTU7 201 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 FAM24BQ8N5W8 94 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 DEFB125Q8N687 156 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 ZFAND2AQ8N6M9 145 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.8□□□□□ -2.12
GTF3A-207ENST00000482655 OR10P1Q8NGE3 313 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 OR4X1Q8NH49 305 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 GNPNAT1Q96EK6 184 aaPredicted RBP1.8□□□□□ -2.12
GTF3A-207ENST00000482655 SH3BGRL3Q9H299 93 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 BANF2Q9H503 90 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 HES4Q9HCC6 221 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 NIT2Q9NQR4 276 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 RPRMQ9NS64 109 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 MINOS1-NBL1R4GNA1 71 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 VPS13BQ7Z7G8 4022 aa1.8□□□□□ -2.12
GTF3A-207ENST00000482655 IGLV10-54A0A075B6I4 117 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 BORCS7-ASMTA0A0B4J1R7 106 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 C3orf85A0A1B0GTC6 90 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 BUB1B-PAK6H3BSN5 160 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 PGLYRP1O75594 196 aaPredicted RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 IFNA17P01571 189 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 IGKV1-5P01602 117 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 IGHV3-7P01780 117 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 RBP4P02753 201 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 TRGC2P03986 189 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 IFNA6P05013 189 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 REG1AP05451 166 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 ATP5G1P05496 136 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 CSN2P05814 226 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 CTXN2P0C2S0 81 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 C8orf88P0DMB2 117 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 BCL2P10415 239 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 DDTP30046 118 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 TAS2R45P59539 299 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 SPCS3P61009 180 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 PKIAP61925 76 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 HERVK_113P63121 156 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 TMEM267Q0VDI3 215 aaPredicted RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 MRPL51Q4U2R6 128 aaKnown RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 MRPL30Q8TCC3 161 aaKnown RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 MAFIPQ8WZ33 124 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 LEAP2Q969E1 77 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 GPR146Q96CH1 333 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 PBDC1Q9BVG4 233 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 WDR61Q9GZS3 305 aaKnown RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 TMEM133Q9H2Q1 129 aa1.79□□□□□ -2.12
GTF3A-207ENST00000482655 KLK5Q9Y337 293 aaPredicted RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 MRPS16Q9Y3D3 137 aaKnown RBP1.79□□□□□ -2.12
GTF3A-207ENST00000482655 TRBV20OR9-2A0A075B6H5 130 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 TRAV9-1A0A075B6T8 112 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 TGIF2-C20orf24A0A0A6YYL0 155 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 PIGBOS1A0A0B4J2F0 54 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 GRIFINA4D1Z8 144 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 NUPR2A6NF83 97 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 ZNF727A8MUV8 499 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 M0R2N4 97 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 S1PR2O95136 353 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 IFNA21P01568 189 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 SCTP09683 121 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 OR10J4P0C629 311 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 IGHV3-30-3P0DP02 117 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 FUSP35637 526 aaKnown RBP eCLIP1.78□□□□□ -2.12
GTF3A-207ENST00000482655 AKR1C3P42330 323 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 AKR1D1P51857 326 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 Q0VG73 95 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 SMCO1Q147U7 214 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 PIGYQ3MUY2 71 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 C1orf194Q5T5A4 169 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 RASL11AQ6T310 242 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 SDIM1Q6ZPB5 146 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 TCTEX1D1Q8N7M0 179 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 ZNF565Q8N9K5 539 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 OR2D3Q8NGH3 330 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 OR5A2Q8NGI9 324 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 OR10D4PQ8NGN7 298 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 OR5C1Q8NGR4 320 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 ZNF714Q96N38 554 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 TXNDC17Q9BRA2 123 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 MAP1LC3AQ9H492 121 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 POLR1DQ9Y2S0 133 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 LSM5Q9Y4Y9 91 aaKnown RBP1.78□□□□□ -2.12
GTF3A-207ENST00000482655 PXMP4Q9Y6I8 212 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 LY96Q9Y6Y9 160 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 ARL2-SNX15V9GYD0 113 aa1.78□□□□□ -2.12
GTF3A-207ENST00000482655 LRP2P98164 4655 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 CTXND1A0A1B0GTU2 59 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 A0A1W2PNM2 257 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 C9JCJ5 164 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 FNDC10F2Z333 226 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 DEGS1O15121 323 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 NUPR1O60356 82 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 LGALS1P09382 135 aaKnown RBP1.77□□□□□ -2.13
GTF3A-207ENST00000482655 LINC00313P59037 77 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 RPL30P62888 115 aaKnown RBP1.77□□□□□ -2.13
GTF3A-207ENST00000482655 MEF2BQ02080 365 aaPredicted RBP1.77□□□□□ -2.13
GTF3A-207ENST00000482655 EDDM3AQ14507 147 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 FAM213BQ8TBF2 198 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 SPTSSAQ969W0 71 aa1.77□□□□□ -2.13
GTF3A-207ENST00000482655 BORCS8Q96FH0 119 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms