RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ABCA13Q86UQ4 5058 aa13.03□□□□□ -0.32
MSH5-215ENST00000482280 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
MSH5-215ENST00000482280 A0A1B0GUV1 79 aa13.03□□□□□ -0.32
MSH5-215ENST00000482280 PLA2G1BP04054 148 aaKnown RBP13.03□□□□□ -0.32
MSH5-215ENST00000482280 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
MSH5-215ENST00000482280 DEFB104AQ8WTQ1 72 aa13.03□□□□□ -0.32
MSH5-215ENST00000482280 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.33
MSH5-215ENST00000482280 AMMECR1LQ6DCA0 310 aa13.02□□□□□ -0.33
MSH5-215ENST00000482280 Q6ZSA8 131 aa13.02□□□□□ -0.33
MSH5-215ENST00000482280 LINC01551Q86U37 167 aa13.01□□□□□ -0.33
MSH5-215ENST00000482280 NCR2O95944 276 aa13□□□□□ -0.33
MSH5-215ENST00000482280 C20orf203Q8NBC4 194 aa13□□□□□ -0.33
MSH5-215ENST00000482280 CLRN3Q8NCR9 226 aa13□□□□□ -0.33
MSH5-215ENST00000482280 TSKUQ8WUA8 353 aa13□□□□□ -0.33
MSH5-215ENST00000482280 GFRA4Q9GZZ7 299 aa13□□□□□ -0.33
MSH5-215ENST00000482280 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
MSH5-215ENST00000482280 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
MSH5-215ENST00000482280 APCSP02743 223 aa12.99□□□□□ -0.33
MSH5-215ENST00000482280 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
MSH5-215ENST00000482280 RPL39LQ96EH5 51 aaKnown RBP12.99□□□□□ -0.33
MSH5-215ENST00000482280 OSTCQ9NRP0 149 aa12.99□□□□□ -0.33
MSH5-215ENST00000482280 IGLV4-60A0A075B6I1 120 aa12.98□□□□□ -0.33
MSH5-215ENST00000482280 A0A1B0GVG6 124 aa12.98□□□□□ -0.33
MSH5-215ENST00000482280 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
MSH5-215ENST00000482280 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
MSH5-215ENST00000482280 PMCHP20382 165 aa12.98□□□□□ -0.33
MSH5-215ENST00000482280 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
MSH5-215ENST00000482280 FAM74A3Q4VXF1 159 aa12.98□□□□□ -0.33
MSH5-215ENST00000482280 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
MSH5-215ENST00000482280 SDHAF1A6NFY7 115 aa12.97□□□□□ -0.33
MSH5-215ENST00000482280 TMEM241Q24JQ0 296 aa12.97□□□□□ -0.33
MSH5-215ENST00000482280 RNASEKQ6P5S7 137 aaKnown RBP12.97□□□□□ -0.33
MSH5-215ENST00000482280 SCXQ7RTU7 201 aa12.97□□□□□ -0.33
MSH5-215ENST00000482280 CHAC1Q9BUX1 264 aa12.97□□□□□ -0.33
MSH5-215ENST00000482280 AP5S1Q9NUS5 200 aa12.97□□□□□ -0.33
MSH5-215ENST00000482280 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.33
MSH5-215ENST00000482280 I3L3M4 83 aa12.96□□□□□ -0.33
MSH5-215ENST00000482280 PRSS1P07477 247 aa12.96□□□□□ -0.33
MSH5-215ENST00000482280 BTF3L4Q96K17 158 aa12.96□□□□□ -0.33
MSH5-215ENST00000482280 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
MSH5-215ENST00000482280 hDV102S1A0JD36 115 aa12.95□□□□□ -0.34
MSH5-215ENST00000482280 H7C423 109 aa12.95□□□□□ -0.34
MSH5-215ENST00000482280 RIGQ13278 110 aa12.95□□□□□ -0.34
MSH5-215ENST00000482280 PEA15Q15121 130 aa12.95□□□□□ -0.34
MSH5-215ENST00000482280 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
MSH5-215ENST00000482280 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.94□□□□□ -0.34
MSH5-215ENST00000482280 TMEM101Q96IK0 257 aa12.94□□□□□ -0.34
MSH5-215ENST00000482280 ADIRFQ15847 76 aa12.93□□□□□ -0.34
MSH5-215ENST00000482280 CFAP161Q6P656 301 aa12.93□□□□□ -0.34
MSH5-215ENST00000482280 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
MSH5-215ENST00000482280 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.92□□□□□ -0.34
MSH5-215ENST00000482280 IGKV2-29A2NJV5 120 aaPredicted RBP12.92□□□□□ -0.34
MSH5-215ENST00000482280 KRTAP26-1Q6PEX3 210 aa12.92□□□□□ -0.34
MSH5-215ENST00000482280 NAT8Q9UHE5 227 aa12.92□□□□□ -0.34
MSH5-215ENST00000482280 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
MSH5-215ENST00000482280 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
MSH5-215ENST00000482280 PPP1R17O96001 155 aa12.91□□□□□ -0.34
MSH5-215ENST00000482280 FGF6P10767 208 aa12.91□□□□□ -0.34
MSH5-215ENST00000482280 ZNF25P17030 456 aaPredicted RBP12.91□□□□□ -0.34
MSH5-215ENST00000482280 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
MSH5-215ENST00000482280 CIRBP-AS1Q8TBR5 109 aa12.91□□□□□ -0.34
MSH5-215ENST00000482280 ISOC2Q96AB3 205 aa12.91□□□□□ -0.34
MSH5-215ENST00000482280 SMDT1Q9H4I9 107 aa12.9□□□□□ -0.34
MSH5-215ENST00000482280 V9GYV3 84 aa12.9□□□□□ -0.34
MSH5-215ENST00000482280 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
MSH5-215ENST00000482280 RPL23P62829 140 aaKnown RBP12.89□□□□□ -0.35
MSH5-215ENST00000482280 AMN1Q8IY45 258 aa12.89□□□□□ -0.35
MSH5-215ENST00000482280 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
MSH5-215ENST00000482280 RAB4AP20338 218 aa12.88□□□□□ -0.35
MSH5-215ENST00000482280 FCER1GP30273 86 aa12.88□□□□□ -0.35
MSH5-215ENST00000482280 OR5A1Q8NGJ0 315 aa12.88□□□□□ -0.35
MSH5-215ENST00000482280 DPH3Q96FX2 82 aa12.88□□□□□ -0.35
MSH5-215ENST00000482280 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
MSH5-215ENST00000482280 CNBPP62633 177 aaKnown RBP12.87□□□□□ -0.35
MSH5-215ENST00000482280 SMAGPQ0VAQ4 97 aa12.87□□□□□ -0.35
MSH5-215ENST00000482280 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
MSH5-215ENST00000482280 J3QL48 77 aa12.86□□□□□ -0.35
MSH5-215ENST00000482280 CHCHD10Q8WYQ3 142 aaPredicted RBP12.86□□□□□ -0.35
MSH5-215ENST00000482280 VCYO14598 125 aa12.85□□□□□ -0.35
MSH5-215ENST00000482280 RNF185Q96GF1 192 aa12.85□□□□□ -0.35
MSH5-215ENST00000482280 KIR2DL4Q99706 377 aa12.85□□□□□ -0.35
MSH5-215ENST00000482280 TRBV27A0A0K0K1C4 114 aa12.84□□□□□ -0.35
MSH5-215ENST00000482280 A0A1B0GW15 77 aa12.84□□□□□ -0.35
MSH5-215ENST00000482280 C7orf77A4D0Y5 90 aa12.84□□□□□ -0.35
MSH5-215ENST00000482280 TSHBP01222 138 aa12.84□□□□□ -0.35
MSH5-215ENST00000482280 S100A8P05109 93 aa12.84□□□□□ -0.35
MSH5-215ENST00000482280 PPP1R2P9O14990 202 aa12.83□□□□□ -0.36
MSH5-215ENST00000482280 GAS8-AS1O95177 125 aa12.83□□□□□ -0.36
MSH5-215ENST00000482280 RPS10P46783 165 aaKnown RBP12.83□□□□□ -0.36
MSH5-215ENST00000482280 CAMPP49913 170 aa12.83□□□□□ -0.36
MSH5-215ENST00000482280 SS18Q15532 418 aa12.83□□□□□ -0.36
MSH5-215ENST00000482280 C9JQL5 133 aa12.82□□□□□ -0.36
MSH5-215ENST00000482280 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
MSH5-215ENST00000482280 ESDP10768 282 aa12.82□□□□□ -0.36
MSH5-215ENST00000482280 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
MSH5-215ENST00000482280 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
MSH5-215ENST00000482280 SMIM27A0A1W2PRY6 76 aa12.81□□□□□ -0.36
MSH5-215ENST00000482280 F8W036 122 aa12.81□□□□□ -0.36
MSH5-215ENST00000482280 XCL1P47992 114 aa12.81□□□□□ -0.36
MSH5-215ENST00000482280 RPL37AP61513 92 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms