RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 MEF2BQ02080 365 aaPredicted RBP0.95□□□□□ -2.26
USH2A-204ENST00000481786 TRAM1Q15629 374 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 LINC00305Q7Z4B0 112 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 LHFPL1Q86WI0 220 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 DEFB107AQ8IZN7 70 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 RNASE11Q8TAA1 199 aaKnown RBP0.95□□□□□ -2.26
USH2A-204ENST00000481786 ZFAND1Q8TCF1 268 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 ASB13Q8WXK3 278 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 AQP10Q96PS8 301 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 ARV1Q9H2C2 271 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 NPVFQ9HCQ7 196 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 IFT46Q9NQC8 304 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 TP73-AS1Q9UF72 201 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 FLVCR2Q9UPI3 526 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 KCNIP3Q9Y2W7 256 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 LENEPQ9Y5L5 61 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 TRBV19A0A075B6N1 114 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 IGKV2-40A0A087WW87 121 aaPredicted RBP0.94□□□□□ -2.26
USH2A-204ENST00000481786 TRAV21A0A0B4J279 112 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 C3orf85A0A1B0GTC6 90 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 TMEM223A0PJW6 202 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 C20orf202A1L168 122 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 EFCAB10A6NFE3 127 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 IFITM5A6NNB3 132 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 GYG2O15488 501 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 SLC25A20O43772 301 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 COX7A2P2O60397 106 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 BCE1O60756 84 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 B3GALNT1O75752 331 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 IGKV2D-40P01614 121 aaPredicted RBP0.94□□□□□ -2.26
USH2A-204ENST00000481786 ESDP10768 282 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 CSN1S1P47710 185 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 RPS20P60866 119 aaKnown RBP0.94□□□□□ -2.26
USH2A-204ENST00000481786 AKR1C1Q04828 323 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 PDE6HQ13956 83 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 IQCJQ1A5X6 159 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 PATE2Q6UY27 113 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 CYP2G1PQ6ZSU1 146 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 FAM19A5Q7Z5A7 132 aaPredicted RBP0.94□□□□□ -2.26
USH2A-204ENST00000481786 NUP35Q8NFH5 326 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 TERB2Q8NHR7 220 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 MITD1Q8WV92 249 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 CYGBQ8WWM9 190 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 TP53RKQ96S44 253 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 ARL6Q9H0F7 186 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 FXYD6Q9H0Q3 95 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 MED28Q9H204 178 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 UQCC1Q9NVA1 299 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 FKBP14Q9NWM8 211 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 PSG8Q9UQ74 426 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 POMPQ9Y244 141 aa0.94□□□□□ -2.26
USH2A-204ENST00000481786 A0A0B4J2A0 478 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 IGHV1-24A0A0C4DH33 117 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 TRBV6-1A0A0K0K1D8 114 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 PDCD5O14737 125 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 MYL12BO14950 172 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 CDS2O95674 445 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 SULT1A3P0DMM9 295 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 SULT1A4P0DMN0 295 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 RNASE3P12724 160 aaKnown RBP0.93□□□□□ -2.26
USH2A-204ENST00000481786 TAS2R46P59540 309 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 LGALSLQ3ZCW2 172 aaPredicted RBP0.93□□□□□ -2.26
USH2A-204ENST00000481786 FAM74A4Q5TZK3 123 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 SPATA24Q86W54 205 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 EXOC3-AS1Q8N2X6 119 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 OR2D3Q8NGH3 330 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 APH1BQ8WW43 257 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 CCDC124Q96CT7 223 aaKnown RBP0.93□□□□□ -2.26
USH2A-204ENST00000481786 DIRAS2Q96HU8 199 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 C20orf166-AS1Q96NR2 134 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 CAMK2N2Q96S95 79 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 IMMP2LQ96T52 175 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 DERL1Q9BUN8 251 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 TPPP3Q9BW30 176 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 NAA60Q9H7X0 242 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 RABL2AQ9UBK7 228 aaPredicted RBP0.93□□□□□ -2.26
USH2A-204ENST00000481786 RABL2BQ9UNT1 228 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 TIMM9Q9Y5J7 89 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 ORC6Q9Y5N6 252 aa0.93□□□□□ -2.26
USH2A-204ENST00000481786 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
USH2A-204ENST00000481786 IGKV3OR2-268A0A0C4DH90 116 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 TCRBV3S1A0A5B6 114 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 GOSR2O14653 212 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 PMP2P02689 132 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 GNAO1P09471 354 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 AKR1C4P17516 323 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 RCVRNP35243 200 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 XCL1P47992 114 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 RAB4BP61018 213 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 RPL37P61927 97 aaKnown RBP0.92□□□□□ -2.26
USH2A-204ENST00000481786 C6orf99Q4VX62 202 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 C10orf113Q5VZT2 155 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 LYZL1Q6UWQ5 148 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 IZUMO2Q6UXV1 221 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 TMEM91Q6ZNR0 172 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 LYZL2Q7Z4W2 148 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 C12orf45Q8N5I9 185 aaPredicted RBP0.92□□□□□ -2.26
USH2A-204ENST00000481786 C3orf22Q8N5N4 141 aa0.92□□□□□ -2.26
USH2A-204ENST00000481786 OR5A1Q8NGJ0 315 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms