RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
UPF3A-206ENST00000480362 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
UPF3A-206ENST00000480362 A0A096LPF7 62 aa12.23□□□□□ -0.45
UPF3A-206ENST00000480362 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
UPF3A-206ENST00000480362 NUDT3O95989 172 aa12.22□□□□□ -0.45
UPF3A-206ENST00000480362 S100A2P29034 98 aa12.22□□□□□ -0.45
UPF3A-206ENST00000480362 AMTP48728 403 aa12.22□□□□□ -0.45
UPF3A-206ENST00000480362 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
UPF3A-206ENST00000480362 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.46
UPF3A-206ENST00000480362 A0A096LNJ9 63 aa12.2□□□□□ -0.46
UPF3A-206ENST00000480362 BTF3P20290 206 aaKnown RBP12.2□□□□□ -0.46
UPF3A-206ENST00000480362 SH2D6Q7Z4S9 175 aa12.2□□□□□ -0.46
UPF3A-206ENST00000480362 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
UPF3A-206ENST00000480362 HBDP02042 147 aa12.19□□□□□ -0.46
UPF3A-206ENST00000480362 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
UPF3A-206ENST00000480362 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
UPF3A-206ENST00000480362 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
UPF3A-206ENST00000480362 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
UPF3A-206ENST00000480362 IGLL5B9A064 214 aa12.18□□□□□ -0.46
UPF3A-206ENST00000480362 G0S2P27469 103 aa12.18□□□□□ -0.46
UPF3A-206ENST00000480362 C2orf66Q6UXQ4 117 aa12.18□□□□□ -0.46
UPF3A-206ENST00000480362 HIST1H2BLQ99880 126 aa12.18□□□□□ -0.46
UPF3A-206ENST00000480362 COL7A1Q02388 2944 aa12.17□□□□□ -0.46
UPF3A-206ENST00000480362 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
UPF3A-206ENST00000480362 FABP4P15090 132 aa12.17□□□□□ -0.46
UPF3A-206ENST00000480362 C20orf203Q8NBC4 194 aa12.17□□□□□ -0.46
UPF3A-206ENST00000480362 CEMP1Q6PRD7 247 aaPredicted RBP12.16□□□□□ -0.46
UPF3A-206ENST00000480362 C15orf53Q8NAA6 179 aa12.16□□□□□ -0.46
UPF3A-206ENST00000480362 TOMM6Q96B49 74 aa12.16□□□□□ -0.46
UPF3A-206ENST00000480362 PACRGQ96M98 296 aaPredicted RBP12.16□□□□□ -0.46
UPF3A-206ENST00000480362 CYSLTR1Q9Y271 337 aa12.16□□□□□ -0.46
UPF3A-206ENST00000480362 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
UPF3A-206ENST00000480362 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.15□□□□□ -0.46
UPF3A-206ENST00000480362 IGKV2-29A2NJV5 120 aaPredicted RBP12.15□□□□□ -0.46
UPF3A-206ENST00000480362 LEPROTL1O95214 131 aa12.15□□□□□ -0.46
UPF3A-206ENST00000480362 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
UPF3A-206ENST00000480362 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
UPF3A-206ENST00000480362 TMEM243Q9BU79 118 aa12.15□□□□□ -0.46
UPF3A-206ENST00000480362 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
UPF3A-206ENST00000480362 SCGB3A1Q96QR1 104 aa12.13□□□□□ -0.47
UPF3A-206ENST00000480362 LINC01549A6NIU2 74 aa12.12□□□□□ -0.47
UPF3A-206ENST00000480362 TIRAPP58753 221 aa12.12□□□□□ -0.47
UPF3A-206ENST00000480362 LELP1Q5T871 98 aa12.12□□□□□ -0.47
UPF3A-206ENST00000480362 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
UPF3A-206ENST00000480362 HSPB8Q9UJY1 196 aa12.12□□□□□ -0.47
UPF3A-206ENST00000480362 LOC105371267A0A1B0GV96 52 aa12.11□□□□□ -0.47
UPF3A-206ENST00000480362 NUPR2A6NF83 97 aa12.11□□□□□ -0.47
UPF3A-206ENST00000480362 UBE2L6O14933 153 aa12.11□□□□□ -0.47
UPF3A-206ENST00000480362 ESRGQ1W209 222 aa12.11□□□□□ -0.47
UPF3A-206ENST00000480362 OR10D4PQ8NGN7 298 aa12.11□□□□□ -0.47
UPF3A-206ENST00000480362 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
UPF3A-206ENST00000480362 H7C423 109 aa12.1□□□□□ -0.47
UPF3A-206ENST00000480362 GAGE6Q13070 117 aa12.1□□□□□ -0.47
UPF3A-206ENST00000480362 ERASQ7Z444 233 aa12.1□□□□□ -0.47
UPF3A-206ENST00000480362 UBE2D4Q9Y2X8 147 aa12.1□□□□□ -0.47
UPF3A-206ENST00000480362 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
UPF3A-206ENST00000480362 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.09□□□□□ -0.47
UPF3A-206ENST00000480362 ATP5LO75964 103 aa12.09□□□□□ -0.47
UPF3A-206ENST00000480362 FGF6P10767 208 aa12.09□□□□□ -0.47
UPF3A-206ENST00000480362 IFI27L1Q96BM0 104 aa12.09□□□□□ -0.47
UPF3A-206ENST00000480362 TMEM141Q96I45 108 aa12.08□□□□□ -0.48
UPF3A-206ENST00000480362 TIMM17AQ99595 171 aa12.08□□□□□ -0.48
UPF3A-206ENST00000480362 TIMM21Q9BVV7 248 aa12.08□□□□□ -0.48
UPF3A-206ENST00000480362 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
UPF3A-206ENST00000480362 APLNQ9ULZ1 77 aa12.08□□□□□ -0.48
UPF3A-206ENST00000480362 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.48
UPF3A-206ENST00000480362 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
UPF3A-206ENST00000480362 KRTDAPP60985 99 aa12.07□□□□□ -0.48
UPF3A-206ENST00000480362 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
UPF3A-206ENST00000480362 AMMECR1LQ6DCA0 310 aa12.07□□□□□ -0.48
UPF3A-206ENST00000480362 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
UPF3A-206ENST00000480362 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
UPF3A-206ENST00000480362 MAP1LC3CQ9BXW4 147 aa12.07□□□□□ -0.48
UPF3A-206ENST00000480362 STAB2Q8WWQ8 2551 aa12.06□□□□□ -0.48
UPF3A-206ENST00000480362 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
UPF3A-206ENST00000480362 C3orf79P0CE67 100 aa12.06□□□□□ -0.48
UPF3A-206ENST00000480362 DGAT2L7PQ6IED9 249 aa12.06□□□□□ -0.48
UPF3A-206ENST00000480362 MRPL52Q86TS9 123 aaKnown RBP12.06□□□□□ -0.48
UPF3A-206ENST00000480362 MUC7Q8TAX7 377 aa12.06□□□□□ -0.48
UPF3A-206ENST00000480362 WWC2-AS2Q96NR7 200 aa12.06□□□□□ -0.48
UPF3A-206ENST00000480362 AKR1D1P51857 326 aa12.05□□□□□ -0.48
UPF3A-206ENST00000480362 CCL18P55774 89 aa12.05□□□□□ -0.48
UPF3A-206ENST00000480362 Q6ZN92 141 aa12.05□□□□□ -0.48
UPF3A-206ENST00000480362 IGLV4-3A0A075B6K6 122 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 H0Y8G0 127 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 PRSS1P07477 247 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 TCTAP57738 103 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 OR5A1Q8NGJ0 315 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 BAALCQ8WXS3 180 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 FAM104AQ969W3 186 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 TMEM101Q96IK0 257 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 LINC00588Q9Y4M8 146 aa12.04□□□□□ -0.48
UPF3A-206ENST00000480362 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
UPF3A-206ENST00000480362 SYS1-DBNDD2H3BUS1 97 aa12.03□□□□□ -0.48
UPF3A-206ENST00000480362 NPSP0C0P6 89 aa12.03□□□□□ -0.48
UPF3A-206ENST00000480362 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
UPF3A-206ENST00000480362 ZC2HC1BQ5TFG8 222 aa12.03□□□□□ -0.48
UPF3A-206ENST00000480362 WFDC10BQ8IUB3 73 aa12.03□□□□□ -0.48
UPF3A-206ENST00000480362 IGLV4-60A0A075B6I1 120 aa12.02□□□□□ -0.49
UPF3A-206ENST00000480362 A0A1B0GUV1 79 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms