RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 EIF5AL1Q6IS14 154 aaKnown RBP6.94□□□□□ -1.3
HDAC8-217ENST00000478743 SEC22CQ9BRL7 303 aa6.94□□□□□ -1.3
HDAC8-217ENST00000478743 ZNF861PO60384 105 aa6.93□□□□□ -1.3
HDAC8-217ENST00000478743 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
HDAC8-217ENST00000478743 OR5A1Q8NGJ0 315 aa6.93□□□□□ -1.3
HDAC8-217ENST00000478743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-217ENST00000478743 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
HDAC8-217ENST00000478743 TSHBP01222 138 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 MGPP08493 103 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 UBE2BP63146 152 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 TSKUQ8WUA8 353 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 PGLYRP4Q96LB8 373 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 CAMK2N2Q96S95 79 aa6.92□□□□□ -1.3
HDAC8-217ENST00000478743 LINC00959A0A1B0GUT2 108 aa6.91□□□□□ -1.3
HDAC8-217ENST00000478743 M0QXV9 152 aa6.91□□□□□ -1.3
HDAC8-217ENST00000478743 ATP6V1G2O95670 118 aa6.91□□□□□ -1.3
HDAC8-217ENST00000478743 GCHFRP30047 84 aa6.91□□□□□ -1.3
HDAC8-217ENST00000478743 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
HDAC8-217ENST00000478743 A0A1W2PPV4 95 aa6.9□□□□□ -1.3
HDAC8-217ENST00000478743 H0YIZ8 118 aa6.9□□□□□ -1.3
HDAC8-217ENST00000478743 BCL2L11O43521 198 aa6.9□□□□□ -1.3
HDAC8-217ENST00000478743 SNAI2O43623 268 aa6.9□□□□□ -1.3
HDAC8-217ENST00000478743 RNASEKQ6P5S7 137 aaKnown RBP6.9□□□□□ -1.3
HDAC8-217ENST00000478743 DEDD2Q8WXF8 326 aa6.9□□□□□ -1.3
HDAC8-217ENST00000478743 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
HDAC8-217ENST00000478743 STAG3L2P0CL84 134 aa6.89□□□□□ -1.31
HDAC8-217ENST00000478743 STAG3L3P0CL85 134 aa6.89□□□□□ -1.31
HDAC8-217ENST00000478743 Q6ZNX1 250 aa6.89□□□□□ -1.31
HDAC8-217ENST00000478743 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
HDAC8-217ENST00000478743 SMIM3Q9BZL3 60 aa6.89□□□□□ -1.31
HDAC8-217ENST00000478743 RBM38Q9H0Z9 239 aaKnown RBP6.89□□□□□ -1.31
HDAC8-217ENST00000478743 MED28Q9H204 178 aa6.89□□□□□ -1.31
HDAC8-217ENST00000478743 PEX7O00628 323 aa6.88□□□□□ -1.31
HDAC8-217ENST00000478743 COTL1Q14019 142 aa6.88□□□□□ -1.31
HDAC8-217ENST00000478743 SPANXN1Q5VSR9 72 aa6.88□□□□□ -1.31
HDAC8-217ENST00000478743 AMMECR1LQ6DCA0 310 aa6.88□□□□□ -1.31
HDAC8-217ENST00000478743 LINC00337Q8N6G1 96 aa6.88□□□□□ -1.31
HDAC8-217ENST00000478743 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
HDAC8-217ENST00000478743 CDC34P49427 236 aaPredicted RBP6.87□□□□□ -1.31
HDAC8-217ENST00000478743 LRRC37A5PQ49AS3 106 aa6.87□□□□□ -1.31
HDAC8-217ENST00000478743 AP1S3Q96PC3 154 aa6.87□□□□□ -1.31
HDAC8-217ENST00000478743 WFDC1Q9HC57 220 aa6.87□□□□□ -1.31
HDAC8-217ENST00000478743 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 SMIM17P0DL12 118 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 RASL11AQ6T310 242 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 RAB24Q969Q5 203 aa6.85□□□□□ -1.31
HDAC8-217ENST00000478743 NAP1L6A6NFF2 107 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 M0R2T5 61 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 SIX6O95475 246 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 UBE2G2P60604 165 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 SS18Q15532 418 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
HDAC8-217ENST00000478743 A6NHS1 94 aa6.83□□□□□ -1.32
HDAC8-217ENST00000478743 NTF3P20783 257 aa6.83□□□□□ -1.32
HDAC8-217ENST00000478743 SCGB1C1Q8TD33 95 aa6.83□□□□□ -1.32
HDAC8-217ENST00000478743 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
HDAC8-217ENST00000478743 CTDSP1Q9GZU7 261 aa6.83□□□□□ -1.32
HDAC8-217ENST00000478743 HSPB11Q9Y547 144 aa6.83□□□□□ -1.32
HDAC8-217ENST00000478743 CXCL1P09341 107 aa6.82□□□□□ -1.32
HDAC8-217ENST00000478743 ESDP10768 282 aa6.82□□□□□ -1.32
HDAC8-217ENST00000478743 DEFA1P59665 94 aa6.82□□□□□ -1.32
HDAC8-217ENST00000478743 SPAG11BQ08648 103 aa6.82□□□□□ -1.32
HDAC8-217ENST00000478743 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
HDAC8-217ENST00000478743 ZFP30Q9Y2G7 519 aa6.82□□□□□ -1.32
HDAC8-217ENST00000478743 LTAP01374 205 aa6.81□□□□□ -1.32
HDAC8-217ENST00000478743 MALP21145 153 aa6.81□□□□□ -1.32
HDAC8-217ENST00000478743 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
HDAC8-217ENST00000478743 COX7A2LO14548 114 aa6.8□□□□□ -1.32
HDAC8-217ENST00000478743 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
HDAC8-217ENST00000478743 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
HDAC8-217ENST00000478743 C5orf38Q86SI9 138 aa6.8□□□□□ -1.32
HDAC8-217ENST00000478743 SMDT1Q9H4I9 107 aa6.8□□□□□ -1.32
HDAC8-217ENST00000478743 TMEM167BQ9NRX6 74 aa6.8□□□□□ -1.32
HDAC8-217ENST00000478743 C6orf48Q9UBA6 75 aa6.8□□□□□ -1.32
HDAC8-217ENST00000478743 MRPL35Q9NZE8 188 aaKnown RBP6.79□□□□□ -1.32
HDAC8-217ENST00000478743 CXorf1O96002 111 aa6.78□□□□□ -1.32
HDAC8-217ENST00000478743 TLX1NBP0CAT3 122 aa6.78□□□□□ -1.32
HDAC8-217ENST00000478743 TRIQKQ629K1 86 aa6.78□□□□□ -1.32
HDAC8-217ENST00000478743 UNQ6190/PRO20217Q6UXQ8 127 aa6.78□□□□□ -1.32
HDAC8-217ENST00000478743 OR2D3Q8NGH3 330 aa6.78□□□□□ -1.32
HDAC8-217ENST00000478743 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
HDAC8-217ENST00000478743 FMC1Q96HJ9 113 aa6.78□□□□□ -1.32
HDAC8-217ENST00000478743 FAM74A7A6NL05 159 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 G3V3Q6 166 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 APCSP02743 223 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.33
HDAC8-217ENST00000478743 UBE2G1P62253 170 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
HDAC8-217ENST00000478743 XP32Q5T750 250 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 C3orf22Q8N5N4 141 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 TPPP3Q9BW30 176 aa6.77□□□□□ -1.33
HDAC8-217ENST00000478743 H7C423 109 aa6.76□□□□□ -1.33
HDAC8-217ENST00000478743 PLA2G10O15496 165 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms