RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 H3BMQ9 156 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 K7EQM0 130 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 ATP6V1G2O95670 118 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 SSTP61278 116 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 SYCNQ0VAF6 134 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 C5orf17Q8NAS9 161 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 KCNIP2Q9NS61 270 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 ARL2-SNX15V9GYD0 113 aa4.38□□□□□ -1.71
PTPRN-214ENST00000477819 IGLV7-46A0A075B6I9 117 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 LOC107984640A0A0U1RRK4 108 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 C17orf112F2Z3M2 114 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 SH2D1AO60880 128 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 TMBIM6P55061 237 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 IL15RAQ13261 267 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 OR10AG1Q8NH19 301 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 EPDR1Q9UM22 224 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 PKIGQ9Y2B9 76 aa4.37□□□□□ -1.71
PTPRN-214ENST00000477819 CARHSP1Q9Y2V2 147 aaKnown RBP4.37□□□□□ -1.71
PTPRN-214ENST00000477819 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
PTPRN-214ENST00000477819 ARL14EPLP0DKL9 152 aa4.36□□□□□ -1.71
PTPRN-214ENST00000477819 RPL12P30050 165 aaKnown RBP4.36□□□□□ -1.71
PTPRN-214ENST00000477819 PQLC2Q6ZP29 291 aa4.36□□□□□ -1.71
PTPRN-214ENST00000477819 ZNF471Q9BX82 626 aaPredicted RBP4.36□□□□□ -1.71
PTPRN-214ENST00000477819 MRPS26Q9BYN8 205 aaKnown RBP4.36□□□□□ -1.71
PTPRN-214ENST00000477819 RPP21Q9H633 154 aaKnown RBP4.36□□□□□ -1.71
PTPRN-214ENST00000477819 V9GYH0 126 aa4.36□□□□□ -1.71
PTPRN-214ENST00000477819 A0A087X002 238 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 FAM168BA1KXE4 195 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 UBE2L6O14933 153 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 BTCP35070 178 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 XCL1P47992 114 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 DEDD2Q8WXF8 326 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 SEC22CQ9BRL7 303 aa4.35□□□□□ -1.71
PTPRN-214ENST00000477819 TRAV6A0A075B6T7 132 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 IGHV1-58A0A0C4DH39 117 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.34□□□□□ -1.71
PTPRN-214ENST00000477819 TRIAP1O43715 76 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 FGF6P10767 208 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 CAMPP49913 170 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 NKX2-5P52952 324 aaPredicted RBP4.34□□□□□ -1.71
PTPRN-214ENST00000477819 MEF2BQ02080 365 aaPredicted RBP4.34□□□□□ -1.71
PTPRN-214ENST00000477819 RPL18AQ02543 176 aaKnown RBP4.34□□□□□ -1.71
PTPRN-214ENST00000477819 FAM162BQ5T6X4 162 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 Q86TA4 180 aa4.34□□□□□ -1.71
PTPRN-214ENST00000477819 OPRPNQ99935 248 aaPredicted RBP4.34□□□□□ -1.71
PTPRN-214ENST00000477819 IGLV4-69A0A075B6H9 119 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 M0QY20 66 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 GCHFRP30047 84 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 PCP4P48539 62 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 MT1HP80294 61 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 NUP35Q8NFH5 326 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 SMIM3Q9BZL3 60 aa4.33□□□□□ -1.72
PTPRN-214ENST00000477819 NAP1L6A6NFF2 107 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 H0YIZ8 118 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 CCL25O15444 150 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 APOMO95445 188 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 MGPP08493 103 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 LINC00173Q6ZV60 143 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 FAM19A5Q7Z5A7 132 aaPredicted RBP4.32□□□□□ -1.72
PTPRN-214ENST00000477819 SCGB1C1Q8TD33 95 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 PPDPFQ9H3Y8 114 aa4.32□□□□□ -1.72
PTPRN-214ENST00000477819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
PTPRN-214ENST00000477819 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
PTPRN-214ENST00000477819 PAGE4O60829 102 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 SIX6O95475 246 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 STAG3L2P0CL84 134 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
PTPRN-214ENST00000477819 LRRC37A5PQ49AS3 106 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 SPANXN1Q5VSR9 72 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 EIF5AL1Q6IS14 154 aaKnown RBP4.31□□□□□ -1.72
PTPRN-214ENST00000477819 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
PTPRN-214ENST00000477819 KRTAP7-1Q8IUC3 87 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 OR5A1Q8NGJ0 315 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 CTDSP1Q9GZU7 261 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 RBM38Q9H0Z9 239 aaKnown RBP4.31□□□□□ -1.72
PTPRN-214ENST00000477819 WFDC1Q9HC57 220 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 ANAPC11Q9NYG5 84 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 USH2AO75445 5202 aa4.31□□□□□ -1.72
PTPRN-214ENST00000477819 PEX7O00628 323 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 SMIM17P0DL12 118 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
PTPRN-214ENST00000477819 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 COX8CQ7Z4L0 72 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 ISOC2Q96AB3 205 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 PGLYRP4Q96LB8 373 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 CAMK2N2Q96S95 79 aa4.3□□□□□ -1.72
PTPRN-214ENST00000477819 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
PTPRN-214ENST00000477819 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
PTPRN-214ENST00000477819 LINC00959A0A1B0GUT2 108 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 SNAI2O43623 268 aa4.29□□□□□ -1.72
PTPRN-214ENST00000477819 ZNF861PO60384 105 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms