RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 VCYO14598 125 aa13.57□□□□□ -0.24
ACTB-210ENST00000477812 ALKBH7Q9BT30 221 aaPredicted RBP13.57□□□□□ -0.24
ACTB-210ENST00000477812 TRAPPC1Q9Y5R8 145 aa13.57□□□□□ -0.24
ACTB-210ENST00000477812 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
ACTB-210ENST00000477812 IGHV1-24A0A0C4DH33 117 aa13.56□□□□□ -0.24
ACTB-210ENST00000477812 PMCHP20382 165 aa13.56□□□□□ -0.24
ACTB-210ENST00000477812 FABP9Q0Z7S8 132 aa13.56□□□□□ -0.24
ACTB-210ENST00000477812 KRTAP1-5Q9BYS1 174 aa13.56□□□□□ -0.24
ACTB-210ENST00000477812 IGLV2-18A0A075B6J9 118 aa13.55□□□□□ -0.24
ACTB-210ENST00000477812 LINC01556Q5JQF7 62 aa13.55□□□□□ -0.24
ACTB-210ENST00000477812 Q6ZR54 194 aa13.55□□□□□ -0.24
ACTB-210ENST00000477812 NIT1Q86X76 327 aa13.55□□□□□ -0.24
ACTB-210ENST00000477812 Q8N3U1 123 aa13.55□□□□□ -0.24
ACTB-210ENST00000477812 CHCHD7Q9BUK0 85 aa13.54□□□□□ -0.24
ACTB-210ENST00000477812 NBDYA0A0U1RRE5 68 aa13.53□□□□□ -0.24
ACTB-210ENST00000477812 ESDP10768 282 aa13.53□□□□□ -0.24
ACTB-210ENST00000477812 AMTP48728 403 aa13.53□□□□□ -0.24
ACTB-210ENST00000477812 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
ACTB-210ENST00000477812 MAP1LC3AQ9H492 121 aa13.53□□□□□ -0.24
ACTB-210ENST00000477812 RYR3Q15413 4870 aa13.53□□□□□ -0.24
ACTB-210ENST00000477812 RAB5AP20339 215 aa13.52□□□□□ -0.25
ACTB-210ENST00000477812 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.25
ACTB-210ENST00000477812 KIR2DL4Q99706 377 aa13.51□□□□□ -0.25
ACTB-210ENST00000477812 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
ACTB-210ENST00000477812 Q8N8P6 123 aa13.5□□□□□ -0.25
ACTB-210ENST00000477812 GAGE6Q13070 117 aa13.49□□□□□ -0.25
ACTB-210ENST00000477812 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
ACTB-210ENST00000477812 TTC32Q5I0X7 151 aa13.49□□□□□ -0.25
ACTB-210ENST00000477812 K7EP13 123 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 M0R2N4 97 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 TCAPO15273 167 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 IGHV3-30P01768 117 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 IGHV3-33P01772 117 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 IGHV3-30-3P0DP02 117 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 IGHV3-30-5P0DP03 117 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 FCER1GP30273 86 aa13.48□□□□□ -0.25
ACTB-210ENST00000477812 NXT2Q9NPJ8 142 aaKnown RBP13.48□□□□□ -0.25
ACTB-210ENST00000477812 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.47□□□□□ -0.25
ACTB-210ENST00000477812 IGKV2-29A2NJV5 120 aaPredicted RBP13.47□□□□□ -0.25
ACTB-210ENST00000477812 TRGC2P03986 189 aa13.47□□□□□ -0.25
ACTB-210ENST00000477812 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
ACTB-210ENST00000477812 PKIAP61925 76 aa13.47□□□□□ -0.25
ACTB-210ENST00000477812 C18orf32Q8TCD1 76 aa13.47□□□□□ -0.25
ACTB-210ENST00000477812 DNAH2Q9P225 4427 aa13.47□□□□□ -0.25
ACTB-210ENST00000477812 A0A087WX48 190 aa13.46□□□□□ -0.25
ACTB-210ENST00000477812 H7C423 109 aa13.46□□□□□ -0.25
ACTB-210ENST00000477812 RBX1P62877 108 aa13.46□□□□□ -0.25
ACTB-210ENST00000477812 Q8N976 141 aa13.46□□□□□ -0.25
ACTB-210ENST00000477812 LINC01546A6NGU7 62 aa13.45□□□□□ -0.26
ACTB-210ENST00000477812 TMEM262E9PQX1 116 aa13.45□□□□□ -0.26
ACTB-210ENST00000477812 C10orf126Q8N4M7 172 aa13.45□□□□□ -0.26
ACTB-210ENST00000477812 C20orf203Q8NBC4 194 aa13.45□□□□□ -0.26
ACTB-210ENST00000477812 TRAV9-2A0A087WT02 112 aa13.44□□□□□ -0.26
ACTB-210ENST00000477812 A0A1B0GUV1 79 aa13.44□□□□□ -0.26
ACTB-210ENST00000477812 IBA57-AS1B1ANH7 110 aa13.44□□□□□ -0.26
ACTB-210ENST00000477812 K7EMI3 77 aa13.44□□□□□ -0.26
ACTB-210ENST00000477812 UBE2L6O14933 153 aa13.44□□□□□ -0.26
ACTB-210ENST00000477812 IGLV4-60A0A075B6I1 120 aa13.43□□□□□ -0.26
ACTB-210ENST00000477812 FGF6P10767 208 aa13.43□□□□□ -0.26
ACTB-210ENST00000477812 MRPL52Q86TS9 123 aaKnown RBP13.43□□□□□ -0.26
ACTB-210ENST00000477812 URB1-AS1Q96HZ7 61 aa13.43□□□□□ -0.26
ACTB-210ENST00000477812 LAGE3Q14657 143 aa13.42□□□□□ -0.26
ACTB-210ENST00000477812 BTF3P20290 206 aaKnown RBP13.41□□□□□ -0.26
ACTB-210ENST00000477812 PRSS3P2Q8NHM4 247 aa13.41□□□□□ -0.26
ACTB-210ENST00000477812 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
ACTB-210ENST00000477812 UBE2D4Q9Y2X8 147 aa13.41□□□□□ -0.26
ACTB-210ENST00000477812 ZNF25P17030 456 aaPredicted RBP13.4□□□□□ -0.26
ACTB-210ENST00000477812 RPL39P62891 51 aaKnown RBP13.4□□□□□ -0.26
ACTB-210ENST00000477812 PRR34Q9NV39 138 aa13.4□□□□□ -0.26
ACTB-210ENST00000477812 ANGP03950 147 aaKnown RBP13.39□□□□□ -0.27
ACTB-210ENST00000477812 ORMDL2Q53FV1 153 aa13.39□□□□□ -0.27
ACTB-210ENST00000477812 AMMECR1LQ6DCA0 310 aa13.39□□□□□ -0.27
ACTB-210ENST00000477812 TIMM21Q9BVV7 248 aa13.39□□□□□ -0.27
ACTB-210ENST00000477812 ENHOQ6UWT2 76 aa13.38□□□□□ -0.27
ACTB-210ENST00000477812 Q6ZRN7 208 aaPredicted RBP13.38□□□□□ -0.27
ACTB-210ENST00000477812 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
ACTB-210ENST00000477812 FAM104AQ969W3 186 aa13.38□□□□□ -0.27
ACTB-210ENST00000477812 CSDC2Q9Y534 153 aaKnown RBP13.38□□□□□ -0.27
ACTB-210ENST00000477812 DNAH10Q8IVF4 4471 aa13.38□□□□□ -0.27
ACTB-210ENST00000477812 C1orf134Q5TEV5 83 aa13.37□□□□□ -0.27
ACTB-210ENST00000477812 RNASEKQ6P5S7 137 aaKnown RBP13.37□□□□□ -0.27
ACTB-210ENST00000477812 FA2HQ7L5A8 372 aa13.37□□□□□ -0.27
ACTB-210ENST00000477812 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
ACTB-210ENST00000477812 DNAH17Q9UFH2 4485 aa13.37□□□□□ -0.27
ACTB-210ENST00000477812 FRAS1Q86XX4 4008 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 RTL8CO15255 209 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 Q0VG73 95 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 LINC00269Q8N2A0 174 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 SPANXA1Q9NS26 97 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 AP5S1Q9NUS5 200 aa13.36□□□□□ -0.27
ACTB-210ENST00000477812 LINC00614P0C842 121 aa13.35□□□□□ -0.27
ACTB-210ENST00000477812 C2orf66Q6UXQ4 117 aa13.35□□□□□ -0.27
ACTB-210ENST00000477812 UBE2WQ96B02 151 aa13.35□□□□□ -0.27
ACTB-210ENST00000477812 CDC42SE2Q9NRR3 84 aa13.35□□□□□ -0.27
ACTB-210ENST00000477812 CYSLTR1Q9Y271 337 aa13.35□□□□□ -0.27
ACTB-210ENST00000477812 A0A096LNJ9 63 aa13.34□□□□□ -0.27
ACTB-210ENST00000477812 TRAV8-3A0A0A6YYJ7 113 aa13.34□□□□□ -0.27
ACTB-210ENST00000477812 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
ACTB-210ENST00000477812 Q9HAA7 133 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms