RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 I3L3M4 83 aa10.49□□□□□ -0.73
SEC13-215ENST00000477547 PMCHP20382 165 aa10.49□□□□□ -0.73
SEC13-215ENST00000477547 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
SEC13-215ENST00000477547 IGHV1-24A0A0C4DH33 117 aa10.48□□□□□ -0.73
SEC13-215ENST00000477547 TRBV27A0A0K0K1C4 114 aa10.48□□□□□ -0.73
SEC13-215ENST00000477547 AMTP48728 403 aa10.48□□□□□ -0.73
SEC13-215ENST00000477547 POLR2KP53803 58 aaKnown RBP10.48□□□□□ -0.73
SEC13-215ENST00000477547 NTM-AS1Q6ZSK4 140 aa10.48□□□□□ -0.73
SEC13-215ENST00000477547 IGLV2-18A0A075B6J9 118 aa10.47□□□□□ -0.73
SEC13-215ENST00000477547 SIVA1O15304 175 aa10.47□□□□□ -0.73
SEC13-215ENST00000477547 TSHBP01222 138 aa10.47□□□□□ -0.73
SEC13-215ENST00000477547 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
SEC13-215ENST00000477547 VCYO14598 125 aa10.46□□□□□ -0.73
SEC13-215ENST00000477547 FCER1GP30273 86 aa10.46□□□□□ -0.73
SEC13-215ENST00000477547 IQCJQ1A5X6 159 aa10.46□□□□□ -0.73
SEC13-215ENST00000477547 KIR2DL4Q99706 377 aa10.46□□□□□ -0.73
SEC13-215ENST00000477547 CHCHD5Q9BSY4 110 aa10.46□□□□□ -0.73
SEC13-215ENST00000477547 TMEM243Q9BU79 118 aa10.46□□□□□ -0.73
SEC13-215ENST00000477547 LOC389332A0A1B0GUA5 103 aa10.45□□□□□ -0.74
SEC13-215ENST00000477547 COLCA2A8K830 154 aa10.45□□□□□ -0.74
SEC13-215ENST00000477547 RAB5AP20339 215 aa10.45□□□□□ -0.74
SEC13-215ENST00000477547 ALKBH7Q9BT30 221 aaPredicted RBP10.45□□□□□ -0.74
SEC13-215ENST00000477547 Q9H8V8 135 aa10.45□□□□□ -0.74
SEC13-215ENST00000477547 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
SEC13-215ENST00000477547 UBE2L6O14933 153 aa10.43□□□□□ -0.74
SEC13-215ENST00000477547 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
SEC13-215ENST00000477547 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
SEC13-215ENST00000477547 NIT1Q86X76 327 aa10.43□□□□□ -0.74
SEC13-215ENST00000477547 Q8N3U1 123 aa10.43□□□□□ -0.74
SEC13-215ENST00000477547 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 TCAPO15273 167 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 PKIAP61925 76 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 GAGE6Q13070 117 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
SEC13-215ENST00000477547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
SEC13-215ENST00000477547 A0A087WX48 190 aa10.41□□□□□ -0.74
SEC13-215ENST00000477547 NBDYA0A0U1RRE5 68 aa10.41□□□□□ -0.74
SEC13-215ENST00000477547 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
SEC13-215ENST00000477547 MPV17L2Q567V2 206 aa10.41□□□□□ -0.74
SEC13-215ENST00000477547 Q8N8P6 123 aa10.41□□□□□ -0.74
SEC13-215ENST00000477547 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
SEC13-215ENST00000477547 ABCA13Q86UQ4 5058 aa10.41□□□□□ -0.74
SEC13-215ENST00000477547 TMEM262E9PQX1 116 aa10.4□□□□□ -0.74
SEC13-215ENST00000477547 M0R2N4 97 aa10.4□□□□□ -0.74
SEC13-215ENST00000477547 TRGC2P03986 189 aa10.4□□□□□ -0.74
SEC13-215ENST00000477547 KRTAP1-5Q9BYS1 174 aa10.4□□□□□ -0.74
SEC13-215ENST00000477547 VPS13DQ5THJ4 4388 aa10.39□□□□□ -0.75
SEC13-215ENST00000477547 ESDP10768 282 aa10.39□□□□□ -0.75
SEC13-215ENST00000477547 IFI27P40305 119 aaPredicted RBP10.39□□□□□ -0.75
SEC13-215ENST00000477547 C10orf126Q8N4M7 172 aa10.39□□□□□ -0.75
SEC13-215ENST00000477547 C18orf32Q8TCD1 76 aa10.39□□□□□ -0.75
SEC13-215ENST00000477547 AMMECR1LQ6DCA0 310 aa10.38□□□□□ -0.75
SEC13-215ENST00000477547 Q8N976 141 aa10.38□□□□□ -0.75
SEC13-215ENST00000477547 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
SEC13-215ENST00000477547 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
SEC13-215ENST00000477547 H7C423 109 aa10.37□□□□□ -0.75
SEC13-215ENST00000477547 RBX1P62877 108 aa10.37□□□□□ -0.75
SEC13-215ENST00000477547 Q6ZR54 194 aa10.37□□□□□ -0.75
SEC13-215ENST00000477547 FA2HQ7L5A8 372 aa10.37□□□□□ -0.75
SEC13-215ENST00000477547 K7EMI3 77 aa10.36□□□□□ -0.75
SEC13-215ENST00000477547 K7EP13 123 aa10.36□□□□□ -0.75
SEC13-215ENST00000477547 FGF6P10767 208 aa10.36□□□□□ -0.75
SEC13-215ENST00000477547 ORMDL2Q53FV1 153 aa10.36□□□□□ -0.75
SEC13-215ENST00000477547 RNASEKQ6P5S7 137 aaKnown RBP10.36□□□□□ -0.75
SEC13-215ENST00000477547 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
SEC13-215ENST00000477547 TMEM18Q96B42 140 aa10.36□□□□□ -0.75
SEC13-215ENST00000477547 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
SEC13-215ENST00000477547 LAGE3Q14657 143 aa10.35□□□□□ -0.75
SEC13-215ENST00000477547 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
SEC13-215ENST00000477547 DNAH6Q9C0G6 4158 aa10.35□□□□□ -0.75
SEC13-215ENST00000477547 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
SEC13-215ENST00000477547 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
SEC13-215ENST00000477547 IGLV4-60A0A075B6I1 120 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 A0A1B0GUV1 79 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 CRPP02741 224 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 SMAGPQ0VAQ4 97 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
SEC13-215ENST00000477547 OR5A1Q8NGJ0 315 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 Q9HAA7 133 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 LINC01546A6NGU7 62 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
SEC13-215ENST00000477547 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
SEC13-215ENST00000477547 RAB5BP61020 215 aa10.32□□□□□ -0.76
SEC13-215ENST00000477547 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
SEC13-215ENST00000477547 C6orf223Q8N319 242 aa10.32□□□□□ -0.76
SEC13-215ENST00000477547 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
SEC13-215ENST00000477547 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
SEC13-215ENST00000477547 C1orf134Q5TEV5 83 aa10.31□□□□□ -0.76
SEC13-215ENST00000477547 Q6ZUT4 128 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms