RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RPRMLQ8N4K4 120 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 Q8N6K4 173 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 Q8N814 137 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 DYNLRB2Q8TF09 96 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 RMI2Q96E14 147 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 SCGB3A1Q96QR1 104 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 RETNLBQ9BQ08 111 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 DEFB126Q9BYW3 111 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 FGF23Q9GZV9 251 aaPredicted RBP1.59□□□□□ -2.15
XRN1-211ENST00000477237 CDC42SE1Q9NRR8 79 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 PHLDA3Q9Y5J5 127 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 BAZ2BQ9UIF8 2168 aaKnown RBP1.59□□□□□ -2.16
XRN1-211ENST00000477237 PLXNB2O15031 1838 aa1.59□□□□□ -2.16
XRN1-211ENST00000477237 COL11A1P12107 1806 aaPredicted RBP1.59□□□□□ -2.16
XRN1-211ENST00000477237 IGKV2D-26A0A0A0MRZ7 120 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 TRBV10-3A0A0K0K1G6 114 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 TMEM223A0PJW6 202 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 TMEM30CPA0ZSE6 113 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 LINC01549A6NIU2 74 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 HCG22E2RYF7 251 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 H3BVH4 76 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 J3QRE1 110 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 ERC2-IT1O76042 136 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 IFI6P09912 130 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 IGHV3-30-3P0DP02 117 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 HMGA1P17096 107 aaKnown RBP1.58□□□□□ -2.16
XRN1-211ENST00000477237 CMC4P56277 68 aaPredicted RBP1.58□□□□□ -2.16
XRN1-211ENST00000477237 ZNF818PQ6ZRF7 136 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 Q8IYB0 196 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 Q8NDZ9 215 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 NPBQ8NG41 125 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 DPM3Q9P2X0 92 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 PRO1854Q9UHT4 67 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 V9GYV3 84 aa1.58□□□□□ -2.16
XRN1-211ENST00000477237 LTBP1Q14766 1721 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 NCOA6Q14686 2063 aaPredicted RBP1.57□□□□□ -2.16
XRN1-211ENST00000477237 ZFHX3Q15911 3703 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 PIGBOS1A0A0B4J2F0 54 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 LOC107984156A0A0G2JMH3 177 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 SMIM27A0A1W2PRY6 76 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 C10orf142B7Z368 130 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 SH2D1AO60880 128 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 IGHV3-11P01762 117 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 CLPSP04118 112 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 S100A3P33764 101 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 SUPT4H1P63272 117 aaKnown RBP1.57□□□□□ -2.16
XRN1-211ENST00000477237 MOBPQ13875 183 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 C9orf116Q5BN46 136 aaPredicted RBP1.57□□□□□ -2.16
XRN1-211ENST00000477237 RNASE13Q5GAN3 156 aaKnown RBP1.57□□□□□ -2.16
XRN1-211ENST00000477237 ARL17AQ8IVW1 177 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 DYNAPQ8N1N2 210 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 C20orf203Q8NBC4 194 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 KLF14Q8TD94 323 aaPredicted RBP1.57□□□□□ -2.16
XRN1-211ENST00000477237 C7orf33Q8WU49 177 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 TXNDC17Q9BRA2 123 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 LINC00467Q9BRT7 94 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 C8orf17Q9NRJ1 99 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 PSENENQ9NZ42 101 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 SHROOM3Q8TF72 1996 aa1.57□□□□□ -2.16
XRN1-211ENST00000477237 NACAE9PAV3 2078 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 MYOFQ9NZM1 2061 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 TRBV7-4A0A0J9YYF1 115 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 SDHAF1A6NFY7 115 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 C17orf51A8MQB3 221 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 LECT2O14960 151 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 LHBP01229 141 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 MGST1P10620 155 aaKnown RBP1.56□□□□□ -2.16
XRN1-211ENST00000477237 FXYD7P58549 80 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 ROMO1P60602 79 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 SERF2P84101 59 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 C9orf129Q5T035 196 aaKnown RBP1.56□□□□□ -2.16
XRN1-211ENST00000477237 C2orf82Q6UX34 121 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 ZNF525Q8N782 197 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 CNEP1R1Q8N9A8 125 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 CDC42SE2Q9NRR3 84 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 TIMM9Q9Y5J7 89 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
XRN1-211ENST00000477237 SCN3AQ9NY46 2000 aa1.56□□□□□ -2.16
XRN1-211ENST00000477237 PLXNB1O43157 2135 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 BRWD3Q6RI45 1802 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 IGLV8-61A0A075B6I0 122 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 A0A096LNJ9 63 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 IGHV3-21A0A0B4J1V1 117 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 IGHV7-4-1A0A0J9YVY3 117 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 CTXND1A0A1B0GTU2 59 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 LOC101927531A0A1B0GV80 90 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 TMEM14DPA8MWL7 114 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 A8MWP4 228 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 K7EMI3 77 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 IGHV1-69P01742 117 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 MSMBP08118 114 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 COX6CP09669 75 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 CISD3P0C7P0 127 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 MIAQ16674 131 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 C1orf134Q5TEV5 83 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 SFTA2Q6UW10 78 aa1.55□□□□□ -2.16
XRN1-211ENST00000477237 SPTSSBQ8NFR3 76 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms