RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 UBE2L6O14933 153 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 UPK1BO75841 260 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 AKR1C3P42330 323 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 FHITP49789 147 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 IFITM3Q01628 133 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 CHCHD10Q8WYQ3 142 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-213ENST00000476777 PGLYRP4Q96LB8 373 aa6.96□□□□□ -1.3
BRCA1-213ENST00000476777 A0A0U1RQV1 116 aa6.95□□□□□ -1.3
BRCA1-213ENST00000476777 MGPP08493 103 aa6.95□□□□□ -1.3
BRCA1-213ENST00000476777 ZNF664Q8N3J9 261 aa6.95□□□□□ -1.3
BRCA1-213ENST00000476777 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
BRCA1-213ENST00000476777 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
BRCA1-213ENST00000476777 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
BRCA1-213ENST00000476777 RPL7L1Q6DKI1 246 aaKnown RBP6.94□□□□□ -1.3
BRCA1-213ENST00000476777 LINC00299Q6ZSB3 139 aa6.94□□□□□ -1.3
BRCA1-213ENST00000476777 STOML3Q8TAV4 291 aa6.94□□□□□ -1.3
BRCA1-213ENST00000476777 S100ZQ8WXG8 99 aa6.94□□□□□ -1.3
BRCA1-213ENST00000476777 PKIGQ9Y2B9 76 aa6.94□□□□□ -1.3
BRCA1-213ENST00000476777 MAP1LC3B2A6NCE7 125 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 AMTP48728 403 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 FOXI1Q12951 378 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 LINC00526Q96FQ7 95 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 MAP1LC3BQ9GZQ8 125 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 MED28Q9H204 178 aa6.93□□□□□ -1.3
BRCA1-213ENST00000476777 S100A9P06702 114 aaKnown RBP6.92□□□□□ -1.3
BRCA1-213ENST00000476777 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
BRCA1-213ENST00000476777 COTL1Q14019 142 aa6.92□□□□□ -1.3
BRCA1-213ENST00000476777 AKR1C8PQ5T2L2 129 aa6.92□□□□□ -1.3
BRCA1-213ENST00000476777 BAGE2Q86Y30 109 aa6.92□□□□□ -1.3
BRCA1-213ENST00000476777 CARD19Q96LW7 228 aa6.92□□□□□ -1.3
BRCA1-213ENST00000476777 NIT2Q9NQR4 276 aa6.92□□□□□ -1.3
BRCA1-213ENST00000476777 TRAV26-2A0A0B4J265 109 aa6.91□□□□□ -1.3
BRCA1-213ENST00000476777 CACNG7P62955 275 aa6.91□□□□□ -1.3
BRCA1-213ENST00000476777 Q5BKY6 102 aa6.91□□□□□ -1.3
BRCA1-213ENST00000476777 BORCS7-ASMTA0A0B4J1R7 106 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 A0A1W2PNN7 141 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 PAGE4O60829 102 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 MT-ND6P03923 174 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 TPPP3Q9BW30 176 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 NDUFA13Q9P0J0 144 aa6.9□□□□□ -1.3
BRCA1-213ENST00000476777 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
BRCA1-213ENST00000476777 XCL1P47992 114 aa6.89□□□□□ -1.31
BRCA1-213ENST00000476777 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
BRCA1-213ENST00000476777 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
BRCA1-213ENST00000476777 AMMECR1LQ6DCA0 310 aa6.89□□□□□ -1.31
BRCA1-213ENST00000476777 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
BRCA1-213ENST00000476777 NTF3P20783 257 aa6.88□□□□□ -1.31
BRCA1-213ENST00000476777 GAGE2BQ13066 116 aa6.88□□□□□ -1.31
BRCA1-213ENST00000476777 PRR4Q16378 134 aa6.88□□□□□ -1.31
BRCA1-213ENST00000476777 RNASEKQ6P5S7 137 aaKnown RBP6.88□□□□□ -1.31
BRCA1-213ENST00000476777 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-213ENST00000476777 LOC107984640A0A0U1RRK4 108 aa6.87□□□□□ -1.31
BRCA1-213ENST00000476777 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-213ENST00000476777 FGF6P10767 208 aa6.87□□□□□ -1.31
BRCA1-213ENST00000476777 Q6ZNX1 250 aa6.87□□□□□ -1.31
BRCA1-213ENST00000476777 DIRC1Q969H9 104 aa6.87□□□□□ -1.31
BRCA1-213ENST00000476777 ALG5Q9Y673 324 aa6.87□□□□□ -1.31
BRCA1-213ENST00000476777 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
BRCA1-213ENST00000476777 H7C423 109 aa6.86□□□□□ -1.31
BRCA1-213ENST00000476777 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
BRCA1-213ENST00000476777 CCL25O15444 150 aa6.86□□□□□ -1.31
BRCA1-213ENST00000476777 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-213ENST00000476777 TMUB2Q71RG4 321 aa6.86□□□□□ -1.31
BRCA1-213ENST00000476777 OR5A1Q8NGJ0 315 aa6.86□□□□□ -1.31
BRCA1-213ENST00000476777 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 F2Z2F3 143 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 NCR2O95944 276 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 IGLV7-43P04211 117 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 TRGC1P0CF51 173 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 BCL2P10415 239 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 RPL35P42766 123 aaKnown RBP6.85□□□□□ -1.31
BRCA1-213ENST00000476777 CAMPP49913 170 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 DEFA1P59665 94 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 RPS20P60866 119 aaKnown RBP6.85□□□□□ -1.31
BRCA1-213ENST00000476777 PHF5AQ7RTV0 110 aaKnown RBP6.85□□□□□ -1.31
BRCA1-213ENST00000476777 GATD1Q8NB37 220 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
BRCA1-213ENST00000476777 FXYD6-FXYD2A0A087WZ82 144 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 H0Y9J4 135 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 PFDN1O60925 122 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-213ENST00000476777 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 SFT2D1Q8WV19 159 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 ISOC2Q96AB3 205 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
BRCA1-213ENST00000476777 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
BRCA1-213ENST00000476777 A0A1B0GV50 99 aa6.83□□□□□ -1.32
BRCA1-213ENST00000476777 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
BRCA1-213ENST00000476777 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-213ENST00000476777 APCSP02743 223 aa6.83□□□□□ -1.32
BRCA1-213ENST00000476777 GIPP09681 153 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-213ENST00000476777 MEF2BQ02080 365 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-213ENST00000476777 CD164L2Q6UWJ8 174 aa6.83□□□□□ -1.32
BRCA1-213ENST00000476777 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms