RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 FAM74A4Q5TZK3 123 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 PRSS3P2Q8NHM4 247 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 C18orf32Q8TCD1 76 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 CHCHD1Q96BP2 118 aaKnown RBP4.46□□□□□ -1.7
CLDN4-205ENST00000476494 DNAJC30Q96LL9 226 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.7
CLDN4-205ENST00000476494 NXT2Q9NPJ8 142 aaKnown RBP4.46□□□□□ -1.7
CLDN4-205ENST00000476494 MRPL16Q9NX20 251 aaKnown RBP4.46□□□□□ -1.7
CLDN4-205ENST00000476494 TRBV10-1A0A0K0K1A3 114 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 M0QY20 66 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 GAS8-AS1O95177 125 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 IGHV3-53P01767 116 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 LINC00614P0C842 121 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 MT1HL1P0DM35 61 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 ESDP10768 282 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 HOXA5P20719 270 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 G0S2P27469 103 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 ZNF56Q15929 161 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 Q6ZTI0 123 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 PACRGQ96M98 296 aaPredicted RBP4.45□□□□□ -1.7
CLDN4-205ENST00000476494 SAMD10Q9BYL1 202 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 JPT2Q9H910 190 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 NIT2Q9NQR4 276 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 DKK2Q9UBU2 259 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
CLDN4-205ENST00000476494 TRBV6-4A0A1B0GX49 114 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 LINC01546A6NGU7 62 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 LINC01549A6NIU2 74 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 VCYO14598 125 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 GAGE7O76087 117 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 NPYP01303 97 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 GAGE12FP0CL80 117 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 GAGE12GP0CL81 117 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 GAGE12IP0CL82 117 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 S100A2P29034 98 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 EMP1P54849 157 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
CLDN4-205ENST00000476494 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
CLDN4-205ENST00000476494 FAM222AQ5U5X8 452 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 CDPF1Q6NVV7 123 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 Q6ZRN7 208 aaPredicted RBP4.44□□□□□ -1.7
CLDN4-205ENST00000476494 FA2HQ7L5A8 372 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 NIT1Q86X76 327 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 Q8N8P6 123 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 NRACQ8N912 160 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 TNFRSF18Q9Y5U5 241 aa4.44□□□□□ -1.7
CLDN4-205ENST00000476494 TRAV26-2A0A0B4J265 109 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 TRGV4A0A0C4DH28 118 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 TRBV27A0A0K0K1C4 114 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 SMKR1H3BMG3 65 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 HSBP1O75506 76 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 SERF1AO75920 110 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 NCR2O95944 276 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 DEFB130BP0DP73 79 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 DEFB130AP0DP74 79 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 DAD1P61803 113 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 TMEM18Q96B42 140 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 ZNF479Q96JC4 524 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 KIR2DL4Q99706 377 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 PRADC1Q9BSG0 188 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 AP5S1Q9NUS5 200 aa4.43□□□□□ -1.7
CLDN4-205ENST00000476494 LOC389332A0A1B0GUA5 103 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 SDHAF1A6NFY7 115 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 I3L3M4 83 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 K7EQD1 137 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 ATP5G1P05496 136 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
CLDN4-205ENST00000476494 IFI27P40305 119 aaPredicted RBP4.42□□□□□ -1.7
CLDN4-205ENST00000476494 POLR2KP53803 58 aaKnown RBP4.42□□□□□ -1.7
CLDN4-205ENST00000476494 RPL36AP83881 106 aaKnown RBP4.42□□□□□ -1.7
CLDN4-205ENST00000476494 FHL2Q14192 279 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 RHOHQ15669 191 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 IQCJQ1A5X6 159 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 ORMDL2Q53FV1 153 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 RNASEKQ6P5S7 137 aaKnown RBP4.42□□□□□ -1.7
CLDN4-205ENST00000476494 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 RPL36ALQ969Q0 106 aaKnown RBP4.42□□□□□ -1.7
CLDN4-205ENST00000476494 TMEM70Q9BUB7 260 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 PRO0255Q9UI72 69 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 HHLA3Q9XRX5 114 aa4.42□□□□□ -1.7
CLDN4-205ENST00000476494 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 IGHV3-73A0A0B4J1V6 119 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 H3BNG1 76 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 LAGE3Q14657 143 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 SH2D6Q7Z4S9 175 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 DAZ4Q86SG3 579 aaKnown RBP4.41□□□□□ -1.7
CLDN4-205ENST00000476494 SLC25A29Q8N8R3 303 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 RPL39LQ96EH5 51 aaKnown RBP4.41□□□□□ -1.7
CLDN4-205ENST00000476494 DAZ3Q9NR90 486 aaKnown RBP4.41□□□□□ -1.7
CLDN4-205ENST00000476494 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
CLDN4-205ENST00000476494 HBDP02042 147 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.71
CLDN4-205ENST00000476494 FCER1GP30273 86 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms