RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 Q5VV11 94 aa0.41□□□□□ -2.34
VPS50-212ENST00000476413 LENEPQ9Y5L5 61 aa0.41□□□□□ -2.34
VPS50-212ENST00000476413 V9GYH0 126 aa0.41□□□□□ -2.34
VPS50-212ENST00000476413 SIPA1L3O60292 1781 aaPredicted RBP0.41□□□□□ -2.34
VPS50-212ENST00000476413 ROCK2O75116 1388 aaKnown RBP0.41□□□□□ -2.34
VPS50-212ENST00000476413 MYOM3Q5VTT5 1437 aa0.4□□□□□ -2.34
VPS50-212ENST00000476413 F6UZH7 168 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 M0R135 149 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 TNFP01375 233 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 S100A1P23297 94 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 GNG4P50150 75 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 C9orf153Q5TBE3 101 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 CFAP126Q5VTH2 177 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 MGST2Q99735 147 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 DYNLRB1Q9NP97 96 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 SCN3BQ9NY72 215 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 UQCR10Q9UDW1 63 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 SPEF2Q9C093 1822 aa0.4□□□□□ -2.35
VPS50-212ENST00000476413 UBE2L5PA0A1B0GUS4 154 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 SPAARA0A1B0GVQ0 90 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 DLEU1O43261 78 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 IFITM1P13164 125 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 ATP5EP56381 51 aaPredicted RBP0.39□□□□□ -2.35
VPS50-212ENST00000476413 PPP3R1P63098 170 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 UBE2L3P68036 154 aaKnown RBP0.39□□□□□ -2.35
VPS50-212ENST00000476413 Q5BKY6 102 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 GTF2H5Q6ZYL4 71 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 C5orf38Q86SI9 138 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 BAGE2Q86Y30 109 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 Q8N8P6 123 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 FAIMQ9NVQ4 179 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 IER3IP1Q9Y5U9 82 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 SPCS1Q9Y6A9 102 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 TPRP12270 2363 aaKnown RBP0.39□□□□□ -2.35
VPS50-212ENST00000476413 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
VPS50-212ENST00000476413 PPIP5K1Q6PFW1 1433 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 SMG6Q86US8 1419 aaKnown RBP0.38□□□□□ -2.35
VPS50-212ENST00000476413 TRBV7-3A0A075B6L6 115 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 F8VRH5 84 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 CORTO00230 105 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 UQCR11O14957 56 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 CFDP00746 253 aaPredicted RBP0.38□□□□□ -2.35
VPS50-212ENST00000476413 CCL18P55774 89 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 HAMPP81172 84 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 DCDP81605 110 aaKnown RBP0.38□□□□□ -2.35
VPS50-212ENST00000476413 COMMD6Q7Z4G1 85 aa0.38□□□□□ -2.35
VPS50-212ENST00000476413 LSM10Q969L4 123 aaKnown RBP0.38□□□□□ -2.35
VPS50-212ENST00000476413 DOCK11Q5JSL3 2073 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 C20orf202A1L168 122 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 ZNF815PA8K554 130 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 KRTDAPP60985 99 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 GNG11P61952 73 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 SSBP3-AS1Q7Z2R9 100 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 ZNF609O15014 1411 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 CASKIN1Q8WXD9 1431 aa0.37□□□□□ -2.35
VPS50-212ENST00000476413 MAST4O15021 2626 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 TRAV22A0A0B4J277 110 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 A0A1B0GV90 55 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 NAP1L6A6NFF2 107 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 AMELXQ99217 191 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 C2orf88Q9BSF0 95 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 CNFNQ9BYD5 112 aa0.36□□□□□ -2.35
VPS50-212ENST00000476413 LOC100130705A0A1B0GUX0 176 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 OOSP1A8MZH6 123 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 CHKB-CPT1BH3BT56 60 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 SFT2D2O95562 160 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 MGPP08493 103 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 COX6CP09669 75 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 TRAPPC2P0DI81 140 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 TRAPPC2BP0DI82 140 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 UBA52P62987 128 aaKnown RBP0.35□□□□□ -2.35
VPS50-212ENST00000476413 TCEAL7Q9BRU2 100 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 CPSF1Q10570 1443 aaKnown RBP0.35□□□□□ -2.35
VPS50-212ENST00000476413 UNC13BO14795 1591 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 WDR7Q9Y4E6 1490 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 LRRC37A3O60309 1634 aa0.35□□□□□ -2.35
VPS50-212ENST00000476413 MYO7AQ13402 2215 aa0.34□□□□□ -2.35
VPS50-212ENST00000476413 IGLC7A0M8Q6 106 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 H3BQ15 152 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 PHLPP1O60346 1717 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 S100PP25815 95 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 PIGYQ3MUY2 71 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 C12orf57Q99622 126 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 VAMP8Q9BV40 100 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 MANBALQ9NQG1 85 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 NDUFA4L2Q9NRX3 87 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 PRO0255Q9UI72 69 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 PXDNQ92626 1479 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 SHANK2Q9UPX8 1470 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 ABCA12Q86UK0 2595 aa0.34□□□□□ -2.36
VPS50-212ENST00000476413 PTPRZ1P23471 2315 aaPredicted RBP0.33□□□□□ -2.36
VPS50-212ENST00000476413 POLQO75417 2590 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 M0R3E3 92 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 HMGN4O00479 90 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 SNCAP37840 140 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 Q6JHZ5 121 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 TSLPQ969D9 159 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 DPH3P1Q9H4G8 78 aa0.33□□□□□ -2.36
VPS50-212ENST00000476413 NXT2Q9NPJ8 142 aaKnown RBP0.33□□□□□ -2.36
VPS50-212ENST00000476413 LINC01558Q9Y6Z2 57 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms