RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 PRELID3AQ96N28 172 aa9.77□□□□□ -0.85
CCNL1-217ENST00000476367 MRPL18Q9H0U6 180 aaKnown RBP9.77□□□□□ -0.85
CCNL1-217ENST00000476367 PRSS47A8MTI9 375 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 TSHBP01222 138 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 IGHV3-30P01768 117 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 IGHV3-33P01772 117 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 IGHV3-30-3P0DP02 117 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 IGHV3-30-5P0DP03 117 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 ST20Q9HBF5 79 aa9.76□□□□□ -0.85
CCNL1-217ENST00000476367 MT-ND6P03923 174 aa9.75□□□□□ -0.85
CCNL1-217ENST00000476367 COX19Q49B96 90 aa9.75□□□□□ -0.85
CCNL1-217ENST00000476367 C6orf223Q8N319 242 aa9.75□□□□□ -0.85
CCNL1-217ENST00000476367 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
CCNL1-217ENST00000476367 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
CCNL1-217ENST00000476367 RTL8CO15255 209 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 RPL32P62910 135 aaKnown RBP9.74□□□□□ -0.85
CCNL1-217ENST00000476367 IQCJQ1A5X6 159 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 EPPK1P58107 5090 aaKnown RBP9.74□□□□□ -0.85
CCNL1-217ENST00000476367 TRAV9-2A0A087WT02 112 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 FABP9Q0Z7S8 132 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 SMIM2Q9BVW6 85 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
CCNL1-217ENST00000476367 I3L3M4 83 aa9.73□□□□□ -0.85
CCNL1-217ENST00000476367 PPP1R17O96001 155 aa9.73□□□□□ -0.85
CCNL1-217ENST00000476367 LAMTOR2Q9Y2Q5 125 aa9.73□□□□□ -0.85
CCNL1-217ENST00000476367 ESDP10768 282 aa9.72□□□□□ -0.85
CCNL1-217ENST00000476367 NIT1Q86X76 327 aa9.72□□□□□ -0.85
CCNL1-217ENST00000476367 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
CCNL1-217ENST00000476367 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
CCNL1-217ENST00000476367 TRBV25-1A0A075B6N4 114 aa9.71□□□□□ -0.85
CCNL1-217ENST00000476367 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.85
CCNL1-217ENST00000476367 VCYO14598 125 aa9.71□□□□□ -0.85
CCNL1-217ENST00000476367 RAB5AP20339 215 aa9.71□□□□□ -0.85
CCNL1-217ENST00000476367 COTL1Q14019 142 aa9.71□□□□□ -0.85
CCNL1-217ENST00000476367 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.85
CCNL1-217ENST00000476367 LOC389332A0A1B0GUA5 103 aa9.71□□□□□ -0.86
CCNL1-217ENST00000476367 TRGC2P03986 189 aa9.71□□□□□ -0.86
CCNL1-217ENST00000476367 PMCHP20382 165 aa9.71□□□□□ -0.86
CCNL1-217ENST00000476367 A0A087WX48 190 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 PRSS29PA6NIE9 313 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 K7EP13 123 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 TCAPO15273 167 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
CCNL1-217ENST00000476367 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 URB1-AS1Q96HZ7 61 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 Q9HAA7 133 aa9.7□□□□□ -0.86
CCNL1-217ENST00000476367 GAGE6Q13070 117 aa9.69□□□□□ -0.86
CCNL1-217ENST00000476367 MPV17L2Q567V2 206 aa9.69□□□□□ -0.86
CCNL1-217ENST00000476367 C18orf32Q8TCD1 76 aa9.69□□□□□ -0.86
CCNL1-217ENST00000476367 FAT2Q9NYQ8 4349 aa9.69□□□□□ -0.86
CCNL1-217ENST00000476367 AMTP48728 403 aa9.68□□□□□ -0.86
CCNL1-217ENST00000476367 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
CCNL1-217ENST00000476367 DNAH17Q9UFH2 4485 aa9.68□□□□□ -0.86
CCNL1-217ENST00000476367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-217ENST00000476367 IGKV2-29A2NJV5 120 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-217ENST00000476367 LINC01546A6NGU7 62 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 IBA57-AS1B1ANH7 110 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 TNP2Q05952 138 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 Q8N8P6 123 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 Q8N976 141 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 IGLV4-60A0A075B6I1 120 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 KLK12Q9UKR0 248 aa9.67□□□□□ -0.86
CCNL1-217ENST00000476367 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
CCNL1-217ENST00000476367 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
CCNL1-217ENST00000476367 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
CCNL1-217ENST00000476367 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
CCNL1-217ENST00000476367 C20orf203Q8NBC4 194 aa9.66□□□□□ -0.86
CCNL1-217ENST00000476367 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
CCNL1-217ENST00000476367 UBE2L6O14933 153 aa9.65□□□□□ -0.86
CCNL1-217ENST00000476367 PKIAP61925 76 aa9.65□□□□□ -0.86
CCNL1-217ENST00000476367 RBX1P62877 108 aa9.65□□□□□ -0.86
CCNL1-217ENST00000476367 RPL39P62891 51 aaKnown RBP9.65□□□□□ -0.86
CCNL1-217ENST00000476367 LAGE3Q14657 143 aa9.65□□□□□ -0.86
CCNL1-217ENST00000476367 A0A1B0GUV1 79 aa9.64□□□□□ -0.87
CCNL1-217ENST00000476367 ANGP03950 147 aaKnown RBP9.64□□□□□ -0.87
CCNL1-217ENST00000476367 NXT2Q9NPJ8 142 aaKnown RBP9.64□□□□□ -0.87
CCNL1-217ENST00000476367 FCER1GP30273 86 aa9.64□□□□□ -0.87
CCNL1-217ENST00000476367 LINC00310P59036 64 aa9.64□□□□□ -0.87
CCNL1-217ENST00000476367 CLPSL2Q6UWE3 100 aa9.64□□□□□ -0.87
CCNL1-217ENST00000476367 UBE2WQ96B02 151 aa9.64□□□□□ -0.87
CCNL1-217ENST00000476367 A0A096LNJ9 63 aa9.63□□□□□ -0.87
CCNL1-217ENST00000476367 PSCAO43653 123 aa9.63□□□□□ -0.87
CCNL1-217ENST00000476367 FGF6P10767 208 aa9.63□□□□□ -0.87
CCNL1-217ENST00000476367 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
CCNL1-217ENST00000476367 UBE2D4Q9Y2X8 147 aa9.63□□□□□ -0.87
CCNL1-217ENST00000476367 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
CCNL1-217ENST00000476367 H7C423 109 aa9.62□□□□□ -0.87
CCNL1-217ENST00000476367 CRPP02741 224 aa9.62□□□□□ -0.87
CCNL1-217ENST00000476367 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
CCNL1-217ENST00000476367 PRR34Q9NV39 138 aa9.62□□□□□ -0.87
CCNL1-217ENST00000476367 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
CCNL1-217ENST00000476367 PKD1P98161 4303 aa9.61□□□□□ -0.87
CCNL1-217ENST00000476367 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
CCNL1-217ENST00000476367 K7EMI3 77 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms