RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 DNAJC30Q96LL9 226 aa7.59□□□□□ -1.19
SP140-208ENST00000473711 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
SP140-208ENST00000473711 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
SP140-208ENST00000473711 LINC01546A6NGU7 62 aa7.58□□□□□ -1.2
SP140-208ENST00000473711 RPL32P62910 135 aaKnown RBP7.58□□□□□ -1.2
SP140-208ENST00000473711 ZNRF2Q8NHG8 242 aa7.58□□□□□ -1.2
SP140-208ENST00000473711 HHLA3Q9XRX5 114 aa7.58□□□□□ -1.2
SP140-208ENST00000473711 LOC100131303A0A0U1RQF7 123 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 TRBV6-4A0A1B0GX49 114 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 GAGE12JA6NER3 117 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 M0R143 59 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 ATP5G1P05496 136 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 HTN3P15516 51 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 GAGE1Q13065 139 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 GAGE4Q13068 117 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 GAGE5Q13069 117 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 LAGE3Q14657 143 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 PHLDA1Q8WV24 401 aaPredicted RBP7.57□□□□□ -1.2
SP140-208ENST00000473711 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
SP140-208ENST00000473711 ZMAT4Q9H898 229 aa7.57□□□□□ -1.2
SP140-208ENST00000473711 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 TRBV27A0A0K0K1C4 114 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 F5H768 121 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 I3L3M4 83 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 NUDT3O95989 172 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 FCER1GP30273 86 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 RPL36AP83881 106 aaKnown RBP7.56□□□□□ -1.2
SP140-208ENST00000473711 RHOHQ15669 191 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 RPL36ALQ969Q0 106 aaKnown RBP7.56□□□□□ -1.2
SP140-208ENST00000473711 KIR2DL4Q99706 377 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
SP140-208ENST00000473711 NOTCH1P46531 2555 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 TRBV7-3A0A075B6L6 115 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 A0A096LNJ9 63 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 TSHBP01222 138 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 CRYBA4P53673 196 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 ORMDL2Q53FV1 153 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 LINC00173Q6ZV60 143 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 B9D2Q9BPU9 175 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 PRO0255Q9UI72 69 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 NBEAL2Q6ZNJ1 2754 aa7.55□□□□□ -1.2
SP140-208ENST00000473711 RYR3Q15413 4870 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 A0A0J9YY99 117 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 K7EMI3 77 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 HBDP02042 147 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 GYPEP15421 78 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 BTF3P20290 206 aaKnown RBP7.54□□□□□ -1.2
SP140-208ENST00000473711 NANOS2P60321 138 aaKnown RBP7.54□□□□□ -1.2
SP140-208ENST00000473711 UBE2D3P61077 147 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 UBE2D2P62837 147 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 C11orf45Q8TAV5 145 aa7.54□□□□□ -1.2
SP140-208ENST00000473711 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
SP140-208ENST00000473711 TRAV26-1A0A087WT03 109 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 KRTDAPP60985 99 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 COTL1Q14019 142 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 TEX43Q6ZNM6 134 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 Q6ZTC4 211 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 DAZ4Q86SG3 579 aaKnown RBP7.52□□□□□ -1.21
SP140-208ENST00000473711 VSIG2Q96IQ7 327 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 MIEN1Q9BRT3 115 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 DAZ3Q9NR90 486 aaKnown RBP7.52□□□□□ -1.21
SP140-208ENST00000473711 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
SP140-208ENST00000473711 C3orf79P0CE67 100 aa7.51□□□□□ -1.21
SP140-208ENST00000473711 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
SP140-208ENST00000473711 TOMM6Q96B49 74 aa7.51□□□□□ -1.21
SP140-208ENST00000473711 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
SP140-208ENST00000473711 SNHG12Q9BXW3 62 aa7.51□□□□□ -1.21
SP140-208ENST00000473711 MGAM2Q2M2H8 2515 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 A0A096LPF7 62 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 LINC00694P0DN24 101 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 G0S2P27469 103 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 RPL39P62891 51 aaKnown RBP7.5□□□□□ -1.21
SP140-208ENST00000473711 ATP6V0E2Q8NHE4 81 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 SCGB3A1Q96QR1 104 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 CHCHD7Q9BUK0 85 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 MAP1LC3CQ9BXW4 147 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 CYSLTR1Q9Y271 337 aa7.5□□□□□ -1.21
SP140-208ENST00000473711 PRKDCP78527 4128 aaKnown RBP7.5□□□□□ -1.21
SP140-208ENST00000473711 H0Y8G0 127 aa7.49□□□□□ -1.21
SP140-208ENST00000473711 NHLRC4P0CG21 123 aaPredicted RBP7.49□□□□□ -1.21
SP140-208ENST00000473711 NTM-AS1Q6ZSK4 140 aa7.49□□□□□ -1.21
SP140-208ENST00000473711 C20orf203Q8NBC4 194 aa7.49□□□□□ -1.21
SP140-208ENST00000473711 IFI27L1Q96BM0 104 aa7.49□□□□□ -1.21
SP140-208ENST00000473711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.48□□□□□ -1.21
SP140-208ENST00000473711 DEFB131BA0A096LNP1 70 aa7.48□□□□□ -1.21
SP140-208ENST00000473711 IGKV2-29A2NJV5 120 aaPredicted RBP7.48□□□□□ -1.21
SP140-208ENST00000473711 SYS1-DBNDD2H3BUS1 97 aa7.48□□□□□ -1.21
SP140-208ENST00000473711 ATP5LO75964 103 aa7.48□□□□□ -1.21
SP140-208ENST00000473711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.47□□□□□ -1.21
SP140-208ENST00000473711 PRSS1P07477 247 aa7.47□□□□□ -1.21
SP140-208ENST00000473711 MRPL23Q16540 153 aaKnown RBP7.47□□□□□ -1.21
SP140-208ENST00000473711 ERASQ7Z444 233 aa7.47□□□□□ -1.21
SP140-208ENST00000473711 SPATA12Q7Z6I5 190 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms