RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FXYD6-FXYD2A0A087WZ82 144 aa5.8□□□□□ -1.48
CPSF4-211ENST00000471455 PANO1I0J062 215 aa5.8□□□□□ -1.48
CPSF4-211ENST00000471455 KRTAP26-1Q6PEX3 210 aa5.8□□□□□ -1.48
CPSF4-211ENST00000471455 NTM-AS1Q6ZSK4 140 aa5.8□□□□□ -1.48
CPSF4-211ENST00000471455 SPACA4Q8TDM5 124 aa5.8□□□□□ -1.48
CPSF4-211ENST00000471455 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
CPSF4-211ENST00000471455 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
CPSF4-211ENST00000471455 UBE2L6O14933 153 aa5.79□□□□□ -1.48
CPSF4-211ENST00000471455 MGPP08493 103 aa5.79□□□□□ -1.48
CPSF4-211ENST00000471455 BAGE2Q86Y30 109 aa5.79□□□□□ -1.48
CPSF4-211ENST00000471455 PLAC8Q9NZF1 115 aa5.79□□□□□ -1.48
CPSF4-211ENST00000471455 PAGE4O60829 102 aa5.78□□□□□ -1.48
CPSF4-211ENST00000471455 SULT1A2P50226 295 aa5.78□□□□□ -1.48
CPSF4-211ENST00000471455 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
CPSF4-211ENST00000471455 C20orf203Q8NBC4 194 aa5.78□□□□□ -1.48
CPSF4-211ENST00000471455 MUC21A0A0G2JKD1 596 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 MUC21A0A140T8X8 626 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 B5MCH6 92 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 PHOX2AO14813 284 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
CPSF4-211ENST00000471455 SSTP61278 116 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 CACNG7P62955 275 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 PGLYRP4Q96LB8 373 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 LINC01600Q96MT4 127 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 TPPP3Q9BW30 176 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 KIF25-AS1Q9Y6Z4 181 aa5.77□□□□□ -1.49
CPSF4-211ENST00000471455 XKRY2A2RUG3 117 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 UMAD1C9J7I0 102 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 M0QY20 66 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 NDUFS6O75380 124 aaKnown RBP5.76□□□□□ -1.49
CPSF4-211ENST00000471455 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 RPS10P46783 165 aaKnown RBP5.76□□□□□ -1.49
CPSF4-211ENST00000471455 AMTP48728 403 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 NKX2-5P52952 324 aaPredicted RBP5.76□□□□□ -1.49
CPSF4-211ENST00000471455 PRR3P79522 188 aaKnown RBP5.76□□□□□ -1.49
CPSF4-211ENST00000471455 LRP2P98164 4655 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 COTL1Q14019 142 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 FER1L6-AS1Q8NA97 138 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
CPSF4-211ENST00000471455 RAB5CP51148 216 aa5.75□□□□□ -1.49
CPSF4-211ENST00000471455 COX6A2Q02221 97 aa5.75□□□□□ -1.49
CPSF4-211ENST00000471455 MAJINQ3KP22 176 aa5.75□□□□□ -1.49
CPSF4-211ENST00000471455 Q5BKY6 102 aa5.75□□□□□ -1.49
CPSF4-211ENST00000471455 SFT2D1Q8WV19 159 aa5.75□□□□□ -1.49
CPSF4-211ENST00000471455 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 IGKV2-24A0A0C4DH68 120 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 GAGE12HA6NDE8 117 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 F2Z2F3 143 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 ARPC5O15511 151 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 AMMECR1LQ6DCA0 310 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 SPINK6Q6UWN8 80 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 KCNRGQ8N5I3 272 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 STPG4Q8N801 248 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 FAM213BQ8TBF2 198 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 MBD3L1Q8WWY6 194 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 NIT2Q9NQR4 276 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 TNXBP22105 4242 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
CPSF4-211ENST00000471455 IGLC6P0CF74 106 aa5.73□□□□□ -1.49
CPSF4-211ENST00000471455 RPL35P42766 123 aaKnown RBP5.73□□□□□ -1.49
CPSF4-211ENST00000471455 TMUB2Q71RG4 321 aa5.73□□□□□ -1.49
CPSF4-211ENST00000471455 OR2D3Q8NGH3 330 aa5.73□□□□□ -1.49
CPSF4-211ENST00000471455 SMIM12Q96EX1 92 aa5.73□□□□□ -1.49
CPSF4-211ENST00000471455 BIN3Q9NQY0 253 aa5.73□□□□□ -1.49
CPSF4-211ENST00000471455 GVQW2A0A096LPI5 108 aaPredicted RBP5.72□□□□□ -1.49
CPSF4-211ENST00000471455 IGKV3OR2-268A0A0C4DH90 116 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 A0A1B0GV50 99 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 H7C423 109 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 NCR2O95944 276 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 EIF5AP63241 154 aaKnown RBP5.72□□□□□ -1.49
CPSF4-211ENST00000471455 HIGD2BQ4VC39 106 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 CHCHD10Q8WYQ3 142 aaPredicted RBP5.72□□□□□ -1.49
CPSF4-211ENST00000471455 GFRA4Q9GZZ7 299 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 MANBALQ9NQG1 85 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 CYTL1Q9NRR1 136 aa5.72□□□□□ -1.49
CPSF4-211ENST00000471455 IFNA1P01562 189 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 GNG4P50150 75 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 ZNF345Q14585 488 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 CENPWQ5EE01 88 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 Q6ZRP5 223 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 PRSS3P2Q8NHM4 247 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 LYPD6BQ8NI32 183 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 C11orf52Q96A22 123 aa5.71□□□□□ -1.5
CPSF4-211ENST00000471455 TEX46H3BTG2 121 aa5.7□□□□□ -1.5
CPSF4-211ENST00000471455 APCSP02743 223 aa5.7□□□□□ -1.5
CPSF4-211ENST00000471455 ZNF25P17030 456 aaPredicted RBP5.7□□□□□ -1.5
CPSF4-211ENST00000471455 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
CPSF4-211ENST00000471455 SMIM15Q7Z3B0 74 aa5.7□□□□□ -1.5
CPSF4-211ENST00000471455 BTF3L4Q96K17 158 aa5.7□□□□□ -1.5
CPSF4-211ENST00000471455 A0A096LNI7 61 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 IGHV1-58A0A0C4DH39 117 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 KANTRA0A1W2PQU2 76 aa5.69□□□□□ -1.5
CPSF4-211ENST00000471455 C19orf71A6NCJ1 209 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms