RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 CCDC58Q4VC31 144 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 CNFNQ9BYD5 112 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 AGPAT4-IT1Q9H0P7 198 aa-0.04□□□□□ -2.42
COPS3-206ENST00000471414 PPP1R17O96001 155 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 IFITM1P13164 125 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 S100A12P80511 92 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 C12orf73Q69YU5 71 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 Q8N8P6 123 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 ARL11Q969Q4 196 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 AQP10Q96PS8 301 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 LINC00470Q9BZP3 86 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 RERGLQ9H628 205 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 PRO0255Q9UI72 69 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 R4GMQ9 66 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 MRC1P22897 1456 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 NHSL1Q5SYE7 1610 aa-0.05□□□□□ -2.42
COPS3-206ENST00000471414 NDUFA2O43678 99 aa-0.06□□□□□ -2.42
COPS3-206ENST00000471414 RBM3P98179 157 aaKnown RBP-0.06□□□□□ -2.42
COPS3-206ENST00000471414 Q6AWC8 147 aa-0.06□□□□□ -2.42
COPS3-206ENST00000471414 LSM10Q969L4 123 aaKnown RBP-0.06□□□□□ -2.42
COPS3-206ENST00000471414 SNRNP25Q9BV90 132 aaKnown RBP-0.06□□□□□ -2.42
COPS3-206ENST00000471414 NPVFQ9HCQ7 196 aa-0.06□□□□□ -2.42
COPS3-206ENST00000471414 SCN3BQ9NY72 215 aa-0.06□□□□□ -2.42
COPS3-206ENST00000471414 SERP1Q9Y6X1 66 aa-0.06□□□□□ -2.42
COPS3-206ENST00000471414 COL7A1Q02388 2944 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 LRRC37A2A6NM11 1700 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 UNC79Q9P2D8 2635 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 HIVEP3Q5T1R4 2406 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 ZNF236Q9UL36 1845 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 FAM25AB3EWG3 89 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 FAM25CB3EWG5 89 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 FAM25GB3EWG6 89 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 CFDP00746 253 aaPredicted RBP-0.07□□□□□ -2.42
COPS3-206ENST00000471414 C10orf128Q5T292 105 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 LENEPQ9Y5L5 61 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 PPIP5K1Q6PFW1 1433 aa-0.07□□□□□ -2.42
COPS3-206ENST00000471414 DMBT1Q9UGM3 2413 aaPredicted RBP-0.07□□□□□ -2.42
COPS3-206ENST00000471414 M0R135 149 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 GNG7O60262 68 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 SPAG11BQ08648 103 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 MEIG1Q5JSS6 88 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 SPAG11AQ6PDA7 123 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 TTC9CQ8N5M4 171 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 SMIM4Q8WVI0 70 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 TSC22D3Q99576 134 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 FAM107BQ9H098 131 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 NAA60Q9H7X0 242 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 CELSR1Q9NYQ6 3014 aa-0.08□□□□□ -2.42
COPS3-206ENST00000471414 LRP6O75581 1613 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 WNK2Q9Y3S1 2297 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 TRAV22A0A0B4J277 110 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 CTXND1A0A1B0GTU2 59 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 C10orf142B7Z368 130 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 M0R3E3 92 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 HMGN1P05114 100 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 BTG2P78543 158 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 V9GYH0 126 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 LAMC1P11047 1609 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 FAM208BQ5VWN6 2430 aa-0.09□□□□□ -2.42
COPS3-206ENST00000471414 MBD5Q9P267 1494 aa-0.1□□□□□ -2.42
COPS3-206ENST00000471414 PI4KAP42356 2102 aa-0.1□□□□□ -2.42
COPS3-206ENST00000471414 CHD9Q3L8U1 2897 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 SBF2Q86WG5 1849 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 NAIPQ13075 1403 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 KIF21AQ7Z4S6 1674 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 K7EP13 123 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 WFDC2Q14508 124 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 SPCS1Q9Y6A9 102 aa-0.1□□□□□ -2.43
COPS3-206ENST00000471414 PPRC1Q5VV67 1664 aaKnown RBP-0.11□□□□□ -2.43
COPS3-206ENST00000471414 BCE1O60756 84 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 HAMPP81172 84 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 Q56UQ5 140 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.11□□□□□ -2.43
COPS3-206ENST00000471414 PPP3R2Q96LZ3 170 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 AMELXQ99217 191 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 UBR5O95071 2799 aaPredicted RBP-0.11□□□□□ -2.43
COPS3-206ENST00000471414 PSME4Q14997 1843 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 BCL9LQ86UU0 1499 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 ERCC6L2Q5T890 1561 aa-0.11□□□□□ -2.43
COPS3-206ENST00000471414 CPSF1Q10570 1443 aaKnown RBP-0.12□□□□□ -2.43
COPS3-206ENST00000471414 MIF4GDA9UHW6 222 aaKnown RBP-0.12□□□□□ -2.43
COPS3-206ENST00000471414 FGF7P21781 194 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 S100A3P33764 101 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 COX17Q14061 63 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 DEFB109BQ30KR1 87 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 Q8IZM0 81 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 C1orf54Q8WWF1 131 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 NDUFA4L2Q9NRX3 87 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 RIMS1Q86UR5 1692 aaKnown RBP-0.12□□□□□ -2.43
COPS3-206ENST00000471414 QRICH2Q9H0J4 1663 aa-0.12□□□□□ -2.43
COPS3-206ENST00000471414 SHROOM2Q13796 1616 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 TCHHQ07283 1943 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 LOC100130705A0A1B0GUX0 176 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 APOC2P02655 101 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 CATR1Q13166 79 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 TMEM170BQ5T4T1 132 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 Q5VSD8 79 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 MGST2Q99735 147 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 SPANXDQ9BXN6 97 aa-0.13□□□□□ -2.43
COPS3-206ENST00000471414 DYNLRB1Q9NP97 96 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms