RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 Q6ZSA8 131 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM75Q8N9X5 138 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 TMEM229BQ8NBD8 167 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 RNASE11Q8TAA1 199 aaKnown RBP3.09□□□□□ -1.91
CKS1B-204ENST00000471245 TRGV9Q99603 122 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 GTSF1LQ9H1H1 148 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 ZNF492Q9P255 531 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
CKS1B-204ENST00000471245 U3KQ87 197 aa3.09□□□□□ -1.91
CKS1B-204ENST00000471245 TGIF2-C20orf24A0A0A6YYL0 155 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 SNRPGP15A8MWD9 76 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 H3BRN7 92 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 C1QBP02746 253 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 MT1HL1P0DM35 61 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 IAPPP10997 89 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 HTN1P15515 57 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 PATE2Q6UY27 113 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 Q6ZTI0 123 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 RMI2Q96E14 147 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 EIF5A2Q9GZV4 153 aaKnown RBP3.08□□□□□ -1.92
CKS1B-204ENST00000471245 VCX3BQ9H321 246 aa3.08□□□□□ -1.92
CKS1B-204ENST00000471245 TIMM8BQ9Y5J9 83 aaPredicted RBP3.08□□□□□ -1.92
CKS1B-204ENST00000471245 SMIM31A0A1B0GVY4 71 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 FAM25AB3EWG3 89 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 FAM25CB3EWG5 89 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 FAM25GB3EWG6 89 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.07□□□□□ -1.92
CKS1B-204ENST00000471245 RGS5O15539 181 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 OR5G3P0C626 314 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 ORM2P19652 201 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 HIST1H1AQ02539 215 aaPredicted RBP3.07□□□□□ -1.92
CKS1B-204ENST00000471245 SMCO1Q147U7 214 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 Q6ZQT7 251 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 SCXQ7RTU7 201 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 TMEM144Q7Z5S9 345 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 TMED4Q7Z7H5 227 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 DAZ4Q86SG3 579 aaKnown RBP3.07□□□□□ -1.92
CKS1B-204ENST00000471245 Q8N814 137 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 TMEM263Q8WUH6 116 aaKnown RBP3.07□□□□□ -1.92
CKS1B-204ENST00000471245 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
CKS1B-204ENST00000471245 GABARAPH6UMI1 98 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 H7BYZ3 331 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 SLC17A3O00476 420 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 IGLV7-43P04211 117 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 RHOBP62745 196 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 SURF2Q15527 256 aaPredicted RBP3.06□□□□□ -1.92
CKS1B-204ENST00000471245 SAMD13Q5VXD3 122 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 SLC51BQ86UW2 128 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 SMIM4Q8WVI0 70 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 LY96Q9Y6Y9 160 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 LPAP08519 4548 aa3.06□□□□□ -1.92
CKS1B-204ENST00000471245 TRAV8-1A0A0A6YYK1 113 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 TRAV12-3A0A0B4J271 114 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 H3BQ15 152 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 AKAIN1P0CW23 69 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 LINC00313P59037 77 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 JOSD1Q15040 202 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-204ENST00000471245 BATFQ16520 125 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 LYPD5Q6UWN5 251 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 CYP2G1PQ6ZSU1 146 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 CLVS1Q8IUQ0 354 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-204ENST00000471245 ZNF431Q8TF32 576 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-204ENST00000471245 LINC00467Q9BRT7 94 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 TMEM147Q9BVK8 224 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 PAIP2BQ9ULR5 123 aaKnown RBP3.05□□□□□ -1.92
CKS1B-204ENST00000471245 HIGD1AQ9Y241 93 aa3.05□□□□□ -1.92
CKS1B-204ENST00000471245 A0A087WXM4 84 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 DISC1C4P0D8 188 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 K7EP13 123 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 PSCAO43653 123 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 SYNGR2O43760 224 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 HYPMO75409 117 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 CFDP00746 253 aaPredicted RBP3.04□□□□□ -1.92
CKS1B-204ENST00000471245 IGHV3-53P01767 116 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 FABP1P07148 127 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 RPL7P18124 248 aaKnown RBP3.04□□□□□ -1.92
CKS1B-204ENST00000471245 EVI2AP22794 236 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 SSBP1Q04837 148 aaKnown RBP3.04□□□□□ -1.92
CKS1B-204ENST00000471245 WFDC2Q14508 124 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 SPCS2Q15005 226 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 GUK1Q16774 197 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 SPANXN5Q5MJ07 72 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 PRR9Q5T870 116 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 STX12Q86Y82 276 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 AMN1Q8IY45 258 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 PRRT1Q99946 306 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 Q9H521 79 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 ICOSQ9Y6W8 199 aa3.04□□□□□ -1.92
CKS1B-204ENST00000471245 TRAV5A0A0B4J249 113 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 B4DEV8 164 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 M0R3E3 92 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 SPINK4O60575 86 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 IL5P05113 134 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 CRYGDP07320 174 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 IGLC2P0DOY2 106 aa3.03□□□□□ -1.92
CKS1B-204ENST00000471245 SLC25A6P12236 298 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms