RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 UBE2L6O14933 153 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 S100A9P06702 114 aaKnown RBP5.54□□□□□ -1.52
XRN1-208ENST00000470537 CXCL1P09341 107 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 SULT1A2P50226 295 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 Q6ZRP5 223 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 NTM-AS1Q6ZSK4 140 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 AQP10Q96PS8 301 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 TMEM243Q9BU79 118 aa5.54□□□□□ -1.52
XRN1-208ENST00000470537 IGKV2-24A0A0C4DH68 120 aa5.53□□□□□ -1.52
XRN1-208ENST00000470537 OR5AL1P0C617 328 aa5.53□□□□□ -1.52
XRN1-208ENST00000470537 RAB5CP51148 216 aa5.53□□□□□ -1.52
XRN1-208ENST00000470537 UBE2G2P60604 165 aa5.53□□□□□ -1.52
XRN1-208ENST00000470537 AP1S3Q96PC3 154 aa5.53□□□□□ -1.52
XRN1-208ENST00000470537 BORCS7-ASMTA0A0B4J1R7 106 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 CTXND1A0A1B0GTU2 59 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 FAM74A7A6NL05 159 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 LTAP01374 205 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 FHITP49789 147 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 LYPD6BQ8NI32 183 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 STOML3Q8TAV4 291 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 MARVELD1Q9BSK0 173 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
XRN1-208ENST00000470537 SNAI2O43623 268 aa5.51□□□□□ -1.53
XRN1-208ENST00000470537 SRSF9Q13242 221 aaKnown RBP eCLIP5.51□□□□□ -1.53
XRN1-208ENST00000470537 ZNF664Q8N3J9 261 aa5.51□□□□□ -1.53
XRN1-208ENST00000470537 OR10AG1Q8NH19 301 aa5.51□□□□□ -1.53
XRN1-208ENST00000470537 PRSS3P2Q8NHM4 247 aa5.51□□□□□ -1.53
XRN1-208ENST00000470537 AKR1C3P42330 323 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 DEFA1P59665 94 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 DEFA3P59666 94 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 AKR1C8PQ5T2L2 129 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 CST9LP1Q5W188 147 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 INO80EQ8NBZ0 244 aaPredicted RBP5.5□□□□□ -1.53
XRN1-208ENST00000470537 PGLYRP4Q96LB8 373 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 PSORS1C2Q9UIG4 136 aa5.5□□□□□ -1.53
XRN1-208ENST00000470537 IGLV4-60A0A075B6I1 120 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 GAGE12HA6NDE8 117 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 M0QY20 66 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 UPK1BO75841 260 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 SSTP61278 116 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 COTL1Q14019 142 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 MED28Q9H204 178 aa5.49□□□□□ -1.53
XRN1-208ENST00000470537 GVQW2A0A096LPI5 108 aaPredicted RBP5.48□□□□□ -1.53
XRN1-208ENST00000470537 TRAV26-2A0A0B4J265 109 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 AMTP48728 403 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 AMMECR1LQ6DCA0 310 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 RASL11AQ6T310 242 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 BAGE2Q86Y30 109 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 C15orf56Q8N910 161 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 NIT2Q9NQR4 276 aa5.48□□□□□ -1.53
XRN1-208ENST00000470537 XKRY2A2RUG3 117 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 MAP1LC3B2A6NCE7 125 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 F2Z2F3 143 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 MGPP08493 103 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 NKX2-5P52952 324 aaPredicted RBP5.47□□□□□ -1.53
XRN1-208ENST00000470537 RPS20P60866 119 aaKnown RBP5.47□□□□□ -1.53
XRN1-208ENST00000470537 CACNG7P62955 275 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 HIGD2BQ4VC39 106 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 MAP1LC3BQ9GZQ8 125 aa5.47□□□□□ -1.53
XRN1-208ENST00000470537 A0A096LNI7 61 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 IGKV3OR2-268A0A0C4DH90 116 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 MUC21A0A0G2JKD1 596 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 MUC21A0A140T8X8 626 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 H7C423 109 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 PFDN1O60925 122 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 TRGC1P0CF51 173 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 ZNF726P1Q15940 193 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 CHCHD10Q8WYQ3 142 aaPredicted RBP5.46□□□□□ -1.54
XRN1-208ENST00000470537 ISOC2Q96AB3 205 aa5.46□□□□□ -1.54
XRN1-208ENST00000470537 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
XRN1-208ENST00000470537 SUMO4Q6EEV6 95 aa5.45□□□□□ -1.54
XRN1-208ENST00000470537 TSKUQ8WUA8 353 aa5.45□□□□□ -1.54
XRN1-208ENST00000470537 BTF3L4Q96K17 158 aa5.45□□□□□ -1.54
XRN1-208ENST00000470537 CARD19Q96LW7 228 aa5.45□□□□□ -1.54
XRN1-208ENST00000470537 TPPP3Q9BW30 176 aa5.45□□□□□ -1.54
XRN1-208ENST00000470537 NCR2O95944 276 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 MT-ND6P03923 174 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 ZNF25P17030 456 aaPredicted RBP5.44□□□□□ -1.54
XRN1-208ENST00000470537 RPL7L1Q6DKI1 246 aaKnown RBP5.44□□□□□ -1.54
XRN1-208ENST00000470537 RNASEKQ6P5S7 137 aaKnown RBP5.44□□□□□ -1.54
XRN1-208ENST00000470537 TMUB2Q71RG4 321 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 FER1L6-AS1Q8NA97 138 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 DIRC1Q969H9 104 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 FAM210AQ96ND0 272 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 GFRA4Q9GZZ7 299 aa5.44□□□□□ -1.54
XRN1-208ENST00000470537 LOC107984640A0A0U1RRK4 108 aa5.43□□□□□ -1.54
XRN1-208ENST00000470537 PAGE4O60829 102 aa5.43□□□□□ -1.54
XRN1-208ENST00000470537 FGF6P10767 208 aa5.43□□□□□ -1.54
XRN1-208ENST00000470537 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
XRN1-208ENST00000470537 TEX261Q6UWH6 196 aa5.43□□□□□ -1.54
XRN1-208ENST00000470537 XCL1P47992 114 aa5.42□□□□□ -1.54
XRN1-208ENST00000470537 PTTG1IPP53801 180 aa5.42□□□□□ -1.54
XRN1-208ENST00000470537 EIF5AP63241 154 aaKnown RBP5.42□□□□□ -1.54
XRN1-208ENST00000470537 SS18Q15532 418 aa5.42□□□□□ -1.54
XRN1-208ENST00000470537 EIF5AL1Q6IS14 154 aaKnown RBP5.42□□□□□ -1.54
XRN1-208ENST00000470537 SMIM15Q7Z3B0 74 aa5.42□□□□□ -1.54
XRN1-208ENST00000470537 OR2D3Q8NGH3 330 aa5.42□□□□□ -1.54
XRN1-208ENST00000470537 OR5A1Q8NGJ0 315 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms