RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 GYPEP15421 78 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 AMTP48728 403 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 TIRAPP58753 221 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 NANOS2P60321 138 aaKnown RBP8.89□□□□□ -0.99
TRAF4-208ENST00000469529 GAGE1Q13065 139 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 GAGE4Q13068 117 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 GAGE5Q13069 117 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 COTL1Q14019 142 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 GAGE13Q4V321 117 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 PDZD11Q5EBL8 140 aa8.89□□□□□ -0.99
TRAF4-208ENST00000469529 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
TRAF4-208ENST00000469529 NPSP0C0P6 89 aa8.88□□□□□ -0.99
TRAF4-208ENST00000469529 FAM19A2Q8N3H0 131 aa8.88□□□□□ -0.99
TRAF4-208ENST00000469529 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
TRAF4-208ENST00000469529 ATP6V0E2Q8NHE4 81 aa8.88□□□□□ -0.99
TRAF4-208ENST00000469529 TOMM6Q96B49 74 aa8.88□□□□□ -0.99
TRAF4-208ENST00000469529 LOC100131303A0A0U1RQF7 123 aa8.87□□□□□ -0.99
TRAF4-208ENST00000469529 H7C423 109 aa8.87□□□□□ -0.99
TRAF4-208ENST00000469529 NUDT3O95989 172 aa8.87□□□□□ -0.99
TRAF4-208ENST00000469529 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
TRAF4-208ENST00000469529 PYGO1Q9Y3Y4 419 aa8.87□□□□□ -0.99
TRAF4-208ENST00000469529 LEPROTL1O95214 131 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 C2orf66Q6UXQ4 117 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 SPATA12Q7Z6I5 190 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 CHCHD7Q9BUK0 85 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 HSPB8Q9UJY1 196 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 ICOSQ9Y6W8 199 aa8.86□□□□□ -0.99
TRAF4-208ENST00000469529 A0A096LPF7 62 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 TRBV6-8A0A0A6YYG3 113 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 ATP5LO75964 103 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 FABP4P15090 132 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 HTN3P15516 51 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 ERASQ7Z444 233 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
TRAF4-208ENST00000469529 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
TRAF4-208ENST00000469529 A0A0J9YY99 117 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 IGIPA6NJ69 53 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 SMAGPQ0VAQ4 97 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 PMCHL1Q16048 86 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 C15orf53Q8NAA6 179 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 PHLDA1Q8WV24 401 aaPredicted RBP8.84□□□□□ -0.99
TRAF4-208ENST00000469529 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
TRAF4-208ENST00000469529 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
TRAF4-208ENST00000469529 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
TRAF4-208ENST00000469529 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
TRAF4-208ENST00000469529 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
TRAF4-208ENST00000469529 TRBV25-1A0A075B6N4 114 aa8.82□□□□□ -1
TRAF4-208ENST00000469529 C3orf84H3BNL1 204 aa8.82□□□□□ -1
TRAF4-208ENST00000469529 OR10D4PQ8NGN7 298 aa8.82□□□□□ -1
TRAF4-208ENST00000469529 TMEM243Q9BU79 118 aa8.82□□□□□ -1
TRAF4-208ENST00000469529 SPANXA1Q9NS26 97 aa8.82□□□□□ -1
TRAF4-208ENST00000469529 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
TRAF4-208ENST00000469529 MRPS36P82909 103 aaKnown RBP8.81□□□□□ -1
TRAF4-208ENST00000469529 LYPD5Q6UWN5 251 aa8.81□□□□□ -1
TRAF4-208ENST00000469529 PET117Q6UWS5 81 aa8.81□□□□□ -1
TRAF4-208ENST00000469529 IFI27L1Q96BM0 104 aa8.81□□□□□ -1
TRAF4-208ENST00000469529 SCGB3A1Q96QR1 104 aa8.81□□□□□ -1
TRAF4-208ENST00000469529 MAP1LC3CQ9BXW4 147 aa8.81□□□□□ -1
TRAF4-208ENST00000469529 A0A1B0GUV1 79 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 C3orf79P0CE67 100 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 ZNF25P17030 456 aaPredicted RBP8.8□□□□□ -1
TRAF4-208ENST00000469529 TCTAP57738 103 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 PKIAP61925 76 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 JOSD1Q15040 202 aaPredicted RBP8.8□□□□□ -1
TRAF4-208ENST00000469529 PAPPA-AS1Q5QFB9 102 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 LELP1Q5T871 98 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 MUC7Q8TAX7 377 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 UBE2D4Q9Y2X8 147 aa8.8□□□□□ -1
TRAF4-208ENST00000469529 TRAV12-1A0A0B4J245 112 aa8.79□□□□□ -1
TRAF4-208ENST00000469529 SYS1-DBNDD2H3BUS1 97 aa8.79□□□□□ -1
TRAF4-208ENST00000469529 AKR1D1P51857 326 aa8.79□□□□□ -1
TRAF4-208ENST00000469529 RPL39P62891 51 aaKnown RBP8.79□□□□□ -1
TRAF4-208ENST00000469529 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
TRAF4-208ENST00000469529 LINC00173Q6ZV60 143 aa8.79□□□□□ -1
TRAF4-208ENST00000469529 FAM104AQ969W3 186 aa8.79□□□□□ -1
TRAF4-208ENST00000469529 FGF6P10767 208 aa8.77□□□□□ -1.01
TRAF4-208ENST00000469529 LINC01545Q5VT33 79 aa8.77□□□□□ -1.01
TRAF4-208ENST00000469529 LGALS9CQ6DKI2 356 aa8.77□□□□□ -1.01
TRAF4-208ENST00000469529 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
TRAF4-208ENST00000469529 AMELXQ99217 191 aa8.77□□□□□ -1.01
TRAF4-208ENST00000469529 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
TRAF4-208ENST00000469529 IGKV2-29A2NJV5 120 aaPredicted RBP8.76□□□□□ -1.01
TRAF4-208ENST00000469529 NUPR2A6NF83 97 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 PRSS1P07477 247 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 PMVKQ15126 192 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 ESRGQ1W209 222 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 CASC10Q5T4H9 136 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 Q6ZN92 141 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 CDC42SE2Q9NRR3 84 aa8.76□□□□□ -1.01
TRAF4-208ENST00000469529 A0A087WX48 190 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 UBE2L6O14933 153 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 KRTDAPP60985 99 aa8.75□□□□□ -1.01
TRAF4-208ENST00000469529 S100A12P80511 92 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms