RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 C20orf78Q9BR46 151 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 MAP1LC3AQ9H492 121 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 ST20Q9HBF5 79 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 DEFB131BA0A096LNP1 70 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 PRSS47A8MTI9 375 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 TCAPO15273 167 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
RPL39-202ENST00000468844 ZNRF2Q8NHG8 242 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
RPL39-202ENST00000468844 PAX4O43316 350 aa12.24□□□□□ -0.45
RPL39-202ENST00000468844 IFI27P40305 119 aaPredicted RBP12.24□□□□□ -0.45
RPL39-202ENST00000468844 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
RPL39-202ENST00000468844 TNFRSF18Q9Y5U5 241 aa12.24□□□□□ -0.45
RPL39-202ENST00000468844 IGLV2-18A0A075B6J9 118 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 IGLC3P0DOY3 106 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 GYPEP15421 78 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
RPL39-202ENST00000468844 GAGE1Q13065 139 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 GAGE4Q13068 117 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 GAGE5Q13069 117 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 NEGR1Q7Z3B1 354 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
RPL39-202ENST00000468844 SMIM2Q9BVW6 85 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 UQCR10Q9UDW1 63 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
RPL39-202ENST00000468844 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
RPL39-202ENST00000468844 LINC00614P0C842 121 aa12.22□□□□□ -0.45
RPL39-202ENST00000468844 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.45
RPL39-202ENST00000468844 UBE2D3P61077 147 aa12.21□□□□□ -0.45
RPL39-202ENST00000468844 UBE2D2P62837 147 aa12.21□□□□□ -0.45
RPL39-202ENST00000468844 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
RPL39-202ENST00000468844 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
RPL39-202ENST00000468844 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.46
RPL39-202ENST00000468844 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.46
RPL39-202ENST00000468844 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.46
RPL39-202ENST00000468844 TRAV9-2A0A087WT02 112 aa12.2□□□□□ -0.46
RPL39-202ENST00000468844 IGHV3-38A0A0C4DH36 116 aa12.2□□□□□ -0.46
RPL39-202ENST00000468844 Q8N8P6 123 aa12.2□□□□□ -0.46
RPL39-202ENST00000468844 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
RPL39-202ENST00000468844 C20orf202A1L168 122 aa12.19□□□□□ -0.46
RPL39-202ENST00000468844 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
RPL39-202ENST00000468844 NXT2Q9NPJ8 142 aaKnown RBP12.19□□□□□ -0.46
RPL39-202ENST00000468844 VCYO14598 125 aa12.19□□□□□ -0.46
RPL39-202ENST00000468844 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
RPL39-202ENST00000468844 I3L3M4 83 aa12.18□□□□□ -0.46
RPL39-202ENST00000468844 LEPROTL1O95214 131 aa12.18□□□□□ -0.46
RPL39-202ENST00000468844 Q6ZN92 141 aa12.18□□□□□ -0.46
RPL39-202ENST00000468844 H3BNG1 76 aa12.17□□□□□ -0.46
RPL39-202ENST00000468844 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
RPL39-202ENST00000468844 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
RPL39-202ENST00000468844 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
RPL39-202ENST00000468844 A0A096LPF7 62 aa12.17□□□□□ -0.46
RPL39-202ENST00000468844 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
RPL39-202ENST00000468844 FA2HQ7L5A8 372 aa12.17□□□□□ -0.46
RPL39-202ENST00000468844 KIR2DL4Q99706 377 aa12.17□□□□□ -0.46
RPL39-202ENST00000468844 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
RPL39-202ENST00000468844 TSHBP01222 138 aa12.16□□□□□ -0.46
RPL39-202ENST00000468844 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
RPL39-202ENST00000468844 BATFQ16520 125 aa12.16□□□□□ -0.46
RPL39-202ENST00000468844 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
RPL39-202ENST00000468844 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
RPL39-202ENST00000468844 LINC00173Q6ZV60 143 aa12.15□□□□□ -0.46
RPL39-202ENST00000468844 ZNF25P17030 456 aaPredicted RBP12.15□□□□□ -0.46
RPL39-202ENST00000468844 COL5A1-AS1Q5SY13 56 aa12.15□□□□□ -0.46
RPL39-202ENST00000468844 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
RPL39-202ENST00000468844 MRPS16Q9Y3D3 137 aaKnown RBP12.14□□□□□ -0.47
RPL39-202ENST00000468844 K7EMI3 77 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 G0S2P27469 103 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 LAGE3Q14657 143 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 NUDT3O95989 172 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 FCER1GP30273 86 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 COTL1Q14019 142 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 MAP1LC3CQ9BXW4 147 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 HSPB8Q9UJY1 196 aa12.13□□□□□ -0.47
RPL39-202ENST00000468844 A0A096LNJ9 63 aa12.12□□□□□ -0.47
RPL39-202ENST00000468844 IGLL5B9A064 214 aa12.12□□□□□ -0.47
RPL39-202ENST00000468844 PET117Q6UWS5 81 aa12.12□□□□□ -0.47
RPL39-202ENST00000468844 DNAH1Q9P2D7 4330 aa12.12□□□□□ -0.47
RPL39-202ENST00000468844 ORMDL2Q53FV1 153 aa12.11□□□□□ -0.47
RPL39-202ENST00000468844 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
RPL39-202ENST00000468844 C15orf53Q8NAA6 179 aa12.1□□□□□ -0.47
RPL39-202ENST00000468844 DLEU1O43261 78 aa12.09□□□□□ -0.47
RPL39-202ENST00000468844 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
RPL39-202ENST00000468844 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
RPL39-202ENST00000468844 STPG4Q8N801 248 aa12.09□□□□□ -0.47
RPL39-202ENST00000468844 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
RPL39-202ENST00000468844 TRBV6-8A0A0A6YYG3 113 aa12.09□□□□□ -0.47
RPL39-202ENST00000468844 VPS13DQ5THJ4 4388 aa12.08□□□□□ -0.48
RPL39-202ENST00000468844 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
RPL39-202ENST00000468844 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
RPL39-202ENST00000468844 HBDP02042 147 aa12.07□□□□□ -0.48
RPL39-202ENST00000468844 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
RPL39-202ENST00000468844 LINC01545Q5VT33 79 aa12.07□□□□□ -0.48
RPL39-202ENST00000468844 LYPD5Q6UWN5 251 aa12.07□□□□□ -0.48
RPL39-202ENST00000468844 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms