RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 SLC17A3O00476 420 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 SYNGR2O43760 224 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 IFNA4P05014 189 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 HRES1P13985 223 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 NPPCP23582 126 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 HLA-DMBP28068 263 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 RRAS2P62070 204 aaPredicted RBP2.11□□□□□ -2.07
GPNMB-207ENST00000468723 ZNF90Q03938 601 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 MSMO1Q15800 293 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 FAM229BQ4G0N7 80 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 TMEM97Q5BJF2 176 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 GDF5OSQ5U4N7 250 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 LHFPL1Q86WI0 220 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 OR4B1Q8NGF8 309 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 TERB2Q8NHR7 220 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 AP3S1Q92572 193 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 BORCS5Q969J3 196 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 TSC22D3Q99576 134 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 TMEM222Q9H0R3 208 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 FKBP11Q9NYL4 201 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 VPS13DQ5THJ4 4388 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 DNAH17Q9UFH2 4485 aa2.11□□□□□ -2.07
GPNMB-207ENST00000468723 IGKV1-17P01599 117 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 CD5P06127 495 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SULT1A3P0DMM9 295 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SULT1A4P0DMN0 295 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 HTN1P15515 57 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SUPT4H1P63272 117 aaKnown RBP2.1□□□□□ -2.07
GPNMB-207ENST00000468723 GUK1Q16774 197 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SPANXN5Q5MJ07 72 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 TOMM5Q8N4H5 51 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 OR10P1Q8NGE3 313 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 OR4X1Q8NH49 305 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SMIM4Q8WVI0 70 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SIGMAR1Q99720 223 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 GINS3Q9BRX5 216 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SLC35B3Q9H1N7 401 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 SMDT1Q9H4I9 107 aa2.1□□□□□ -2.07
GPNMB-207ENST00000468723 KLK5Q9Y337 293 aaPredicted RBP2.1□□□□□ -2.07
GPNMB-207ENST00000468723 TRAV12-2A0A075B6T6 113 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 FAM236DA0A1B0GTK5 79 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 A8MUN3 132 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 C9JCJ5 164 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 SSSCA1O60232 199 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 ATG12O94817 140 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 CDS2O95674 445 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 IGLC1P0CG04 106 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 FAM236CP0DP71 79 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 RPL5P46777 297 aaKnown RBP2.09□□□□□ -2.07
GPNMB-207ENST00000468723 DEFA1P59665 94 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 POLR2GP62487 172 aaKnown RBP eCLIP2.09□□□□□ -2.07
GPNMB-207ENST00000468723 AKR1C1Q04828 323 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 SMCO1Q147U7 214 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 KLK9Q2XQG4 91 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 LGALS9BQ3B8N2 356 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 LGALS9CQ6DKI2 356 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 SPATA12Q7Z6I5 190 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 PRRT1Q99946 306 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 PSENENQ9NZ42 101 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 GSKIPQ9P0R6 139 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 SCP2D1Q9UJQ7 156 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 KLK9Q9UKQ9 250 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 APLNQ9ULZ1 77 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 V9GYH0 126 aa2.09□□□□□ -2.07
GPNMB-207ENST00000468723 DNAH2Q9P225 4427 aa2.09□□□□□ -2.08
GPNMB-207ENST00000468723 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
GPNMB-207ENST00000468723 NBEAL2Q6ZNJ1 2754 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 TRAV30A0A087WSZ9 112 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 IGHV3-73A0A0B4J1V6 119 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 TRAV5A0A0B4J249 113 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 NUPR2A6NF83 97 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 FAM24AA6NFZ4 105 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 ZNF705FA8MVS1 300 aaPredicted RBP2.08□□□□□ -2.08
GPNMB-207ENST00000468723 M0R2Z0 102 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 PLA2G10O15496 165 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 SIX6O95475 246 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 SFT2D2O95562 160 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 METTL15P1P0C7V9 234 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 G0S2P27469 103 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 FUSP35637 526 aaKnown RBP eCLIP2.08□□□□□ -2.08
GPNMB-207ENST00000468723 EIF2B2P49770 351 aaKnown RBP2.08□□□□□ -2.08
GPNMB-207ENST00000468723 TMBIM6P55061 237 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 RHOBP62745 196 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 SLC38A11Q08AI6 406 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 SPINK13Q1W4C9 94 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 C12orf74Q32Q52 190 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 NMSQ5H8A3 153 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 TRIQKQ629K1 86 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 UBE2DNLQ8IWF7 75 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 OR8I2Q8N0Y5 310 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 ZNF664Q8N3J9 261 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 ANKRD29Q8N6D5 301 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 DCANP1Q8TF63 244 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 HIGD2AQ9BW72 106 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 RSL24D1Q9UHA3 163 aaKnown RBP2.08□□□□□ -2.08
GPNMB-207ENST00000468723 PRELID1Q9Y255 219 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 TMEM56-RWDD3S4R434 201 aa2.08□□□□□ -2.08
GPNMB-207ENST00000468723 DEFB131BA0A096LNP1 70 aa2.07□□□□□ -2.08
GPNMB-207ENST00000468723 TRAV10A0A0B4J240 114 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms