RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 CADP27708 2225 aa6.8□□□□□ -1.32
LCA5-203ENST00000467898 TRBV12-3P01733 135 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 IGF1P05019 195 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 APOC4P55056 127 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 LY6G5BQ8NDX9 201 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 ZGRF1Q86YA3 2104 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 LINC00574Q9H8X3 128 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
LCA5-203ENST00000467898 APC2O95996 2303 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 GRNP28799 593 aaKnown RBP6.78□□□□□ -1.32
LCA5-203ENST00000467898 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 IGHV7-4-1A0A0J9YVY3 117 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 RNF223E7ERA6 249 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 Q1T7F1 81 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 DYNLRB2Q8TF09 96 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 CCL13Q99616 98 aa6.78□□□□□ -1.32
LCA5-203ENST00000467898 IGKV1-16P04430 117 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 RUSC1-AS1Q66K80 236 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 C11orf45Q8TAV5 145 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 TRAV12-3A0A0B4J271 114 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 SOCS3O14543 225 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 NDUFS5O43920 106 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 SPANXN1Q5VSR9 72 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 LEAP2Q969E1 77 aa6.77□□□□□ -1.33
LCA5-203ENST00000467898 NBEAQ8NFP9 2946 aa6.76□□□□□ -1.33
LCA5-203ENST00000467898 E7EQL1 145 aa6.76□□□□□ -1.33
LCA5-203ENST00000467898 DEFB108BQ8NET1 73 aa6.76□□□□□ -1.33
LCA5-203ENST00000467898 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
LCA5-203ENST00000467898 MIFP14174 115 aa6.76□□□□□ -1.33
LCA5-203ENST00000467898 IGKV2-40A0A087WW87 121 aaPredicted RBP6.75□□□□□ -1.33
LCA5-203ENST00000467898 IGKV2D-40P01614 121 aaPredicted RBP6.75□□□□□ -1.33
LCA5-203ENST00000467898 IGHV3-48P01763 117 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 BPESC1Q9GZL8 116 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 POLEQ07864 2286 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 IGHV3-30-3P0DP02 117 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 RNASE4P34096 147 aaKnown RBP6.75□□□□□ -1.33
LCA5-203ENST00000467898 FBXL19-AS1Q494R0 122 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 TNCP24821 2201 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 KALRNO60229 2985 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 ZNF833PQ6ZTB9 187 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 RMI2Q96E14 147 aa6.75□□□□□ -1.33
LCA5-203ENST00000467898 ADGRG4Q8IZF6 3080 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 RELNP78509 3460 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 ACACAQ13085 2346 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 PLCE1Q9P212 2302 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 PTPRQQ9UMZ3 2332 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 KHDC1LQ5JSQ8 128 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 H3BS24 57 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 LYPD2Q6UXB3 125 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 ZFAND3Q9H8U3 227 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 ZNRD1Q9P1U0 126 aa6.74□□□□□ -1.33
LCA5-203ENST00000467898 IGHV4OR15-8A0A075B7B6 117 aa6.73□□□□□ -1.33
LCA5-203ENST00000467898 A0A087WW49 117 aa6.73□□□□□ -1.33
LCA5-203ENST00000467898 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
LCA5-203ENST00000467898 C11orf68Q9H3H3 251 aaKnown RBP6.73□□□□□ -1.33
LCA5-203ENST00000467898 C14orf132Q9NPU4 83 aa6.73□□□□□ -1.33
LCA5-203ENST00000467898 MED14OSP0DP75 135 aa6.73□□□□□ -1.33
LCA5-203ENST00000467898 Q6ZSV7 163 aa6.73□□□□□ -1.33
LCA5-203ENST00000467898 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
LCA5-203ENST00000467898 UBE2BP63146 152 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 SOSTDC1Q6X4U4 206 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 Q6ZVQ6 151 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 Q8TAT8 98 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 VCYO14598 125 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 C11orf44Q8N8P7 122 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 LINC01560Q8TB33 94 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 KAAG1Q9UBP8 84 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 PIEZO2Q9H5I5 2752 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 ARFGEF3Q5TH69 2177 aa6.72□□□□□ -1.33
LCA5-203ENST00000467898 CCL3L1P16619 93 aa6.71□□□□□ -1.33
LCA5-203ENST00000467898 CCL17Q92583 94 aa6.71□□□□□ -1.33
LCA5-203ENST00000467898 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.33
LCA5-203ENST00000467898 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 ADARB2-AS1A8MUL3 147 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 M0R378 163 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 CD28P10747 220 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 SNURFQ9Y675 71 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 PTPRZ1P23471 2315 aaPredicted RBP6.71□□□□□ -1.34
LCA5-203ENST00000467898 IGKV1-17P01599 117 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 POLR2KP53803 58 aaKnown RBP6.71□□□□□ -1.34
LCA5-203ENST00000467898 ENHOQ6UWT2 76 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 GPHB5Q86YW7 130 aa6.71□□□□□ -1.34
LCA5-203ENST00000467898 SPTBN2O15020 2390 aa6.7□□□□□ -1.34
LCA5-203ENST00000467898 ICE1Q9Y2F5 2266 aa6.7□□□□□ -1.34
LCA5-203ENST00000467898 CEP295Q9C0D2 2601 aa6.7□□□□□ -1.34
LCA5-203ENST00000467898 UNQ9165/PRO28630Q6UXU0 137 aa6.7□□□□□ -1.34
LCA5-203ENST00000467898 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
LCA5-203ENST00000467898 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
LCA5-203ENST00000467898 PHF5AQ7RTV0 110 aaKnown RBP6.7□□□□□ -1.34
LCA5-203ENST00000467898 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
LCA5-203ENST00000467898 IGLV2-23P01705 113 aa6.69□□□□□ -1.34
LCA5-203ENST00000467898 C10orf55Q5SWW7 151 aa6.69□□□□□ -1.34
LCA5-203ENST00000467898 HIST2H2BCQ6DN03 193 aa6.69□□□□□ -1.34
LCA5-203ENST00000467898 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
LCA5-203ENST00000467898 UBE2L6O14933 153 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms