RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 GCGP01275 180 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 SNRPEP62304 92 aaKnown RBP3.35□□□□□ -1.87
NCL-208ENST00000466274 SMUG1Q53HV7 270 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 MIR17HGQ75NE6 70 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 MRPS26Q9BYN8 205 aaKnown RBP3.35□□□□□ -1.87
NCL-208ENST00000466274 VCX3BQ9H321 246 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 OTORQ9NRC9 128 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 MCUBQ9NWR8 336 aa3.35□□□□□ -1.87
NCL-208ENST00000466274 H3BMQ9 156 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 L7N2F9 121 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 UBE2L6O14933 153 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 ATP6V1G2O95670 118 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 S100A11P31949 105 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 ZNF80P51504 273 aaPredicted RBP3.34□□□□□ -1.87
NCL-208ENST00000466274 BCAP31P51572 246 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 UBE2L3P68036 154 aaKnown RBP3.34□□□□□ -1.87
NCL-208ENST00000466274 IAH1Q2TAA2 248 aaPredicted RBP3.34□□□□□ -1.87
NCL-208ENST00000466274 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.87
NCL-208ENST00000466274 AP3S1Q92572 193 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 TMEM243Q9BU79 118 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 FLVCR2Q9UPI3 526 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 PSG8Q9UQ74 426 aa3.34□□□□□ -1.87
NCL-208ENST00000466274 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
NCL-208ENST00000466274 IGLV4-60A0A075B6I1 120 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 UBE2L5PA0A1B0GUS4 154 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 IGSF23A1L1A6 192 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 C9orf170A2RU37 121 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 H3BVH4 76 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 ZNF861PO60384 105 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 CST7O76096 145 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 APOMO95445 188 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 VPREB1P12018 145 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 TPT1P13693 172 aaKnown RBP3.33□□□□□ -1.88
NCL-208ENST00000466274 FGF7P21781 194 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 TAS2R45P59539 299 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 UBE2BP63146 152 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 HBG1P69891 147 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 HBG2P69892 147 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 IL18Q14116 193 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 ZNF56Q15929 161 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 SAPCD1Q5SSQ6 148 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 ZFP82Q8N141 532 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 CHCHD10Q8WYQ3 142 aaPredicted RBP3.33□□□□□ -1.88
NCL-208ENST00000466274 MED28Q9H204 178 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 KCNIP2Q9NS61 270 aa3.33□□□□□ -1.88
NCL-208ENST00000466274 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
NCL-208ENST00000466274 IGLV4-69A0A075B6H9 119 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 A0A087WXM4 84 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 TRAV34A0A0B4J273 112 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 IGKV3OR2-268A0A0C4DH90 116 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 FABP5P3A8MUU1 101 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 KRTAP16-1A8MUX0 517 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 B4DEV8 164 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 M0R381 172 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 RGS5O15539 181 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 ARMS2P0C7Q2 107 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 BTCP35070 178 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 FAUP35544 74 aaKnown RBP3.32□□□□□ -1.88
NCL-208ENST00000466274 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
NCL-208ENST00000466274 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 KHDC3LQ587J8 217 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 PRNTQ86SH4 94 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 MBD2Q9UBB5 411 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 V9GYH0 126 aa3.32□□□□□ -1.88
NCL-208ENST00000466274 A0A087X002 238 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 GNG5P63218 68 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 STX12Q86Y82 276 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 OR5C1Q8NGR4 320 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 MCFD2Q8NI22 146 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 SDHCQ99643 169 aaPredicted RBP3.31□□□□□ -1.88
NCL-208ENST00000466274 SLC25A21Q9BQT8 299 aaPredicted RBP3.31□□□□□ -1.88
NCL-208ENST00000466274 NPCDR1Q9BY65 106 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 Q9H521 79 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 LINC00846Q9NV44 126 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 GSKIPQ9P0R6 139 aa3.31□□□□□ -1.88
NCL-208ENST00000466274 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
NCL-208ENST00000466274 BCL2P10415 239 aa3.3□□□□□ -1.88
NCL-208ENST00000466274 PVALBP20472 110 aaPredicted RBP3.3□□□□□ -1.88
NCL-208ENST00000466274 DNLZQ5SXM8 178 aa3.3□□□□□ -1.88
NCL-208ENST00000466274 LINC00526Q96FQ7 95 aa3.3□□□□□ -1.88
NCL-208ENST00000466274 SGK494Q96LW2 274 aa3.3□□□□□ -1.88
NCL-208ENST00000466274 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
NCL-208ENST00000466274 C19orf71A6NCJ1 209 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 C17orf112F2Z3M2 114 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 SMIM17P0DL12 118 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 SULT1A1P50225 295 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 DSCR10P59022 87 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 FLI1Q01543 452 aaPredicted RBP3.29□□□□□ -1.88
NCL-208ENST00000466274 IL15RAQ13261 267 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 AMMECR1LQ6DCA0 310 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 NUP35Q8NFH5 326 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 WFDC1Q9HC57 220 aa3.29□□□□□ -1.88
NCL-208ENST00000466274 RSL24D1Q9UHA3 163 aaKnown RBP3.29□□□□□ -1.88
NCL-208ENST00000466274 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms