RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 A0A087WX48 190 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 A0A1B0GV90 55 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 H7C1H1 209 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 DPM2O94777 84 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 TSHBP01222 138 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 IGKCP01834 107 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 RPL39P62891 51 aaKnown RBP5.96□□□□□ -1.46
UBE4B-205ENST00000465408 C9orf66Q5T8R8 295 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 ZC2HC1BQ5TFG8 222 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 SLC25A34Q6PIV7 304 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 RNASE8Q8TDE3 154 aaKnown RBP5.96□□□□□ -1.46
UBE4B-205ENST00000465408 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 KIR2DL4Q99706 377 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 C2orf88Q9BSF0 95 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 ZMAT4Q9H898 229 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 Q9UF83 564 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 SORL1Q92673 2214 aa5.96□□□□□ -1.46
UBE4B-205ENST00000465408 TRBV27A0A0K0K1C4 114 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 RHODO00212 210 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 IGHV3-53P01767 116 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 COX8AP10176 69 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 RHOHQ15669 191 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 PIK3CD-AS1Q5SR53 167 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 ZFAND6Q6FIF0 208 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 Q6ZTI0 123 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 GTSCR1Q86UQ5 136 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 TMEM263Q8WUH6 116 aaKnown RBP5.95□□□□□ -1.46
UBE4B-205ENST00000465408 EDA2RQ9HAV5 297 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 CHTOPQ9Y3Y2 248 aaKnown RBP5.95□□□□□ -1.46
UBE4B-205ENST00000465408 ALMS1Q8TCU4 4167 aa5.95□□□□□ -1.46
UBE4B-205ENST00000465408 TRAV12-1A0A0B4J245 112 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 I3L3M4 83 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 NMUP48645 174 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 HINT1P49773 126 aaPredicted RBP5.94□□□□□ -1.46
UBE4B-205ENST00000465408 ERASQ7Z444 233 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 MRPL52Q86TS9 123 aaKnown RBP5.94□□□□□ -1.46
UBE4B-205ENST00000465408 NEXN-AS1Q8NBZ9 246 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 CSNK1G2-AS1Q8NCQ2 148 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 OR4C5Q8NGB2 326 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 C1QTNF4Q9BXJ3 329 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
UBE4B-205ENST00000465408 MRPS16Q9Y3D3 137 aaKnown RBP5.94□□□□□ -1.46
UBE4B-205ENST00000465408 TNFRSF18Q9Y5U5 241 aa5.94□□□□□ -1.46
UBE4B-205ENST00000465408 IGKV2D-26A0A0A0MRZ7 120 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 IGHV3-38A0A0C4DH36 116 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 GAGE12BA1L429 117 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 PLAC8L1A1L4L8 177 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 PRSS29PA6NIE9 313 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 F8VRH5 84 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 GAGE7O76087 117 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 NHLRC4P0CG21 123 aaPredicted RBP5.93□□□□□ -1.46
UBE4B-205ENST00000465408 GAGE12FP0CL80 117 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 GAGE12GP0CL81 117 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 GAGE12IP0CL82 117 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 FGF6P10767 208 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 INSL3P51460 131 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 RRN3P1Q2M238 152 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 C2orf91Q6ZV80 131 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 PCP2Q8IVA1 136 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 PHLDA1Q8WV24 401 aaPredicted RBP5.93□□□□□ -1.46
UBE4B-205ENST00000465408 C16orf74Q96GX8 76 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 ZNF479Q96JC4 524 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 HHLA3Q9XRX5 114 aa5.93□□□□□ -1.46
UBE4B-205ENST00000465408 IGIPA6NJ69 53 aa5.92□□□□□ -1.46
UBE4B-205ENST00000465408 A6NJY4 79 aa5.92□□□□□ -1.46
UBE4B-205ENST00000465408 G0S2P27469 103 aa5.92□□□□□ -1.46
UBE4B-205ENST00000465408 C20orf203Q8NBC4 194 aa5.92□□□□□ -1.46
UBE4B-205ENST00000465408 TMEM141Q96I45 108 aa5.92□□□□□ -1.46
UBE4B-205ENST00000465408 OPRPNQ99935 248 aaPredicted RBP5.92□□□□□ -1.46
UBE4B-205ENST00000465408 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
UBE4B-205ENST00000465408 DNAH10Q8IVF4 4471 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 TRAV4A0A0B4J268 109 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 PLNP26678 52 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 EMP1P54849 157 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 KRTAP10-11P60412 298 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 DAZ2Q13117 558 aaKnown RBP5.91□□□□□ -1.46
UBE4B-205ENST00000465408 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
UBE4B-205ENST00000465408 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 DNAJC30Q96LL9 226 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 TIMM17AQ99595 171 aa5.91□□□□□ -1.46
UBE4B-205ENST00000465408 ZMAT5Q9UDW3 170 aaKnown RBP5.91□□□□□ -1.46
UBE4B-205ENST00000465408 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 TRGV2A0A075B6R0 118 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-205ENST00000465408 IGKV2-29A2NJV5 120 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-205ENST00000465408 LINC01549A6NIU2 74 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 K7EQD1 137 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 PMVKQ15126 192 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 MPV17L2Q567V2 206 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 ZNRF2Q8NHG8 242 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 CST9LQ9H4G1 147 aa5.9□□□□□ -1.46
UBE4B-205ENST00000465408 IGLV4-3A0A075B6K6 122 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 GAGE12JA6NER3 117 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 C11orf86A6NJI1 115 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 GAGE1Q13065 139 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 GAGE4Q13068 117 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 GAGE5Q13069 117 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 COTL1Q14019 142 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 GAGE13Q4V321 117 aa5.89□□□□□ -1.47
UBE4B-205ENST00000465408 COL5A1-AS1Q5SY13 56 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms