RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 KRTDAPP60985 99 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 TDRG1Q3Y452 100 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 DNLZQ5SXM8 178 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 FAM74A4Q5TZK3 123 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 C12orf54Q6X4T0 127 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 FA2HQ7L5A8 372 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 NEGR1Q7Z3B1 354 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 RPL39LQ96EH5 51 aaKnown RBP2.59□□□□□ -1.99
SCN3A-206ENST00000465043 PRAC1Q96KF2 57 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 DPH3P1Q9H4G8 78 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 NIT2Q9NQR4 276 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 MRPL16Q9NX20 251 aaKnown RBP2.59□□□□□ -1.99
SCN3A-206ENST00000465043 KIF25-AS1Q9Y6Z4 181 aa2.59□□□□□ -1.99
SCN3A-206ENST00000465043 ATRQ13535 2644 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 TENM1Q9UKZ4 2725 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 IGHV1-24A0A0C4DH33 117 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 H0Y8G0 127 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 TCAPO15273 167 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 NXPH4O95158 308 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 IGHV3-53P01767 116 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 CRYGDP07320 174 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 C3orf79P0CE67 100 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 SMIM17P0DL12 118 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 P0DMU3 169 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 FAM231AP0DMU4 169 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 FAM231CP0DMU5 169 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 EMP1P54849 157 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 LINC00315P59091 139 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 NUTF2P61970 127 aaKnown RBP2.58□□□□□ -2
SCN3A-206ENST00000465043 ZNF415Q09FC8 603 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 ZNF56Q15929 161 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 SPATA12Q7Z6I5 190 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 C11orf72Q8NBR9 251 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 WFDC9Q8NEX5 89 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 RASL10AQ92737 203 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 CHCHD1Q96BP2 118 aaKnown RBP2.58□□□□□ -2
SCN3A-206ENST00000465043 AP1S3Q96PC3 154 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 MAP1LC3AQ9H492 121 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 GOLT1BQ9Y3E0 138 aa2.58□□□□□ -2
SCN3A-206ENST00000465043 NIPBLQ6KC79 2804 aaeCLIP2.57□□□□□ -2
SCN3A-206ENST00000465043 IGLV2-18A0A075B6J9 118 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 A0A096LNJ9 63 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 TRGV1A0A0A0MS02 117 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 M0R2P5 195 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 DEFB4AO15263 64 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 PPBPP02775 128 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 SMIM6P0DI80 62 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 INSL3P51460 131 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 JOSD1Q15040 202 aaPredicted RBP2.57□□□□□ -2
SCN3A-206ENST00000465043 MORN3Q6PF18 240 aaPredicted RBP2.57□□□□□ -2
SCN3A-206ENST00000465043 ATOH7Q8N100 152 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 Q8N8P6 123 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 Q8N976 141 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 CSNK1G2-AS1Q8NCQ2 148 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 MRAP2Q96G30 205 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 C18orf15Q96N68 181 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 PMCHL2Q9BQD1 86 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 LINC00467Q9BRT7 94 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 PRO1933Q9H354 126 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 NOP10Q9NPE3 64 aaKnown RBP2.57□□□□□ -2
SCN3A-206ENST00000465043 PRR34Q9NV39 138 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 Q9UF83 564 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 CMYA5Q8N3K9 4069 aa2.57□□□□□ -2
SCN3A-206ENST00000465043 PLAC8L1A1L4L8 177 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 A8MU10 97 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 G3V4G9 280 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 M0QY20 66 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 RS1O15537 224 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 LEPROTL1O95214 131 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 PRB2P02812 416 aaPredicted RBP2.56□□□□□ -2
SCN3A-206ENST00000465043 FCER1GP30273 86 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 LAGE3Q14657 143 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 RRN3P1Q2M238 152 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 DEFB135Q30KP9 77 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 MAJINQ3KP22 176 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 CFAP126Q5VTH2 177 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 Q6ZTI0 123 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 POM121L12Q8N7R1 296 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 RNASE8Q8TDE3 154 aaKnown RBP2.56□□□□□ -2
SCN3A-206ENST00000465043 TMEM158Q8WZ71 300 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 C20orf144Q9BQM9 153 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 SPXQ9BT56 116 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 SMIM2Q9BVW6 85 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 ST20Q9HBF5 79 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 NXT2Q9NPJ8 142 aaKnown RBP2.56□□□□□ -2
SCN3A-206ENST00000465043 LAMTOR2Q9Y2Q5 125 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 FBN1P35555 2871 aaKnown RBP2.56□□□□□ -2
SCN3A-206ENST00000465043 NACAE9PAV3 2078 aa2.56□□□□□ -2
SCN3A-206ENST00000465043 VWFP04275 2813 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 IGHV3-38A0A0C4DH36 116 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 SDHAF1A6NFY7 115 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 LINC01546A6NGU7 62 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 A8MWV9 139 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 SYS1-DBNDD2H3BUS1 97 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 HBDP02042 147 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 DEFB130BP0DP73 79 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 DEFB130AP0DP74 79 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 TCTAP57738 103 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
SCN3A-206ENST00000465043 UFSP1Q6NVU6 142 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms