RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
SEMA3D-203ENST00000463315 TMEM262E9PQX1 116 aa9.2□□□□□ -0.94
SEMA3D-203ENST00000463315 Q0VG73 95 aa9.2□□□□□ -0.94
SEMA3D-203ENST00000463315 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
SEMA3D-203ENST00000463315 RMI2Q96E14 147 aa9.2□□□□□ -0.94
SEMA3D-203ENST00000463315 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
SEMA3D-203ENST00000463315 PKD1P98161 4303 aa9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 H7C423 109 aa9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 ADCYAP1P18509 176 aa9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 C10orf91Q5T1B1 145 aa9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 RPL39LQ96EH5 51 aaKnown RBP9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
SEMA3D-203ENST00000463315 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 I3L3M4 83 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 PPBPP02775 128 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 CAMPP49913 170 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 ATRAIDQ6UW56 229 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 TMEM70Q9BUB7 260 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 KRTAP4-8Q9BYQ9 185 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 TMEM242Q9NWH2 141 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
SEMA3D-203ENST00000463315 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 PSCAO43653 123 aa9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 AMTP48728 403 aa9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 POLR2KP53803 58 aaKnown RBP9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 MPV17L2Q567V2 206 aa9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 BTF3L4Q96K17 158 aa9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 CARHSP1Q9Y2V2 147 aaKnown RBP9.17□□□□□ -0.94
SEMA3D-203ENST00000463315 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 A0A087WTM6 91 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 PHOX2AO14813 284 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 RBX1P62877 108 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 NRACQ8N912 160 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 Q9HAA7 133 aa9.16□□□□□ -0.94
SEMA3D-203ENST00000463315 PKHD1P08F94 4074 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 VCYO14598 125 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 UBE2L6O14933 153 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 TCAPO15273 167 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 PMCHP20382 165 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 MIAQ16674 131 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 CDPF1Q6NVV7 123 aa9.15□□□□□ -0.94
SEMA3D-203ENST00000463315 BIRC6Q9NR09 4857 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 LRCOL1A6NCL2 159 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 CRPP02741 224 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 APCSP02743 223 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 CKS2P33552 79 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 GAGE6Q13070 117 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 RHEBQ15382 184 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 ENHOQ6UWT2 76 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
SEMA3D-203ENST00000463315 ESDP10768 282 aa9.13□□□□□ -0.95
SEMA3D-203ENST00000463315 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
SEMA3D-203ENST00000463315 Q8N976 141 aa9.13□□□□□ -0.95
SEMA3D-203ENST00000463315 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
SEMA3D-203ENST00000463315 LAMTOR2Q9Y2Q5 125 aa9.13□□□□□ -0.95
SEMA3D-203ENST00000463315 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
SEMA3D-203ENST00000463315 TSHBP01222 138 aa9.12□□□□□ -0.95
SEMA3D-203ENST00000463315 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
SEMA3D-203ENST00000463315 ORMDL3Q8N138 153 aa9.12□□□□□ -0.95
SEMA3D-203ENST00000463315 C1orf43Q9BWL3 253 aa9.12□□□□□ -0.95
SEMA3D-203ENST00000463315 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 D6R8Y8 96 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 SMKR1H3BMG3 65 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 TNFRSF6BO95407 300 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 S100PP25815 95 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 SMAGPQ0VAQ4 97 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 LINC00269Q8N2A0 174 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 C20orf203Q8NBC4 194 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 CLRN3Q8NCR9 226 aa9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
SEMA3D-203ENST00000463315 C7orf77A4D0Y5 90 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 C16orf90A8MZG2 172 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 REG3AQ06141 175 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 NDUFA5Q16718 116 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 COX19Q49B96 90 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
SEMA3D-203ENST00000463315 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
SEMA3D-203ENST00000463315 FCER1GP30273 86 aa9.09□□□□□ -0.95
SEMA3D-203ENST00000463315 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
SEMA3D-203ENST00000463315 AMMECR1LQ6DCA0 310 aa9.09□□□□□ -0.95
SEMA3D-203ENST00000463315 SVBPQ8N300 66 aa9.09□□□□□ -0.95
SEMA3D-203ENST00000463315 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
SEMA3D-203ENST00000463315 FGF6P10767 208 aa9.08□□□□□ -0.96
SEMA3D-203ENST00000463315 Q8N814 137 aa9.08□□□□□ -0.96
SEMA3D-203ENST00000463315 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
SEMA3D-203ENST00000463315 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
SEMA3D-203ENST00000463315 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
SEMA3D-203ENST00000463315 PRELID3AQ96N28 172 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms