RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 TRGC2P03986 189 aa13.18□□□□□ -0.3
HLA-F-222ENST00000462777 WFDC2Q14508 124 aa13.18□□□□□ -0.3
HLA-F-222ENST00000462777 TMEM136Q6ZRR5 245 aa13.18□□□□□ -0.3
HLA-F-222ENST00000462777 Q6ZSA8 131 aa13.18□□□□□ -0.3
HLA-F-222ENST00000462777 SSBP4Q9BWG4 385 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-222ENST00000462777 ASIPP42127 132 aa13.17□□□□□ -0.3
HLA-F-222ENST00000462777 CACNG7P62955 275 aa13.17□□□□□ -0.3
HLA-F-222ENST00000462777 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
HLA-F-222ENST00000462777 DAZ4Q86SG3 579 aaKnown RBP13.17□□□□□ -0.3
HLA-F-222ENST00000462777 Q8N3U1 123 aa13.17□□□□□ -0.3
HLA-F-222ENST00000462777 DAZ3Q9NR90 486 aaKnown RBP13.17□□□□□ -0.3
HLA-F-222ENST00000462777 KRTAP29-1A8MX34 341 aaPredicted RBP13.16□□□□□ -0.3
HLA-F-222ENST00000462777 PHOX2AO14813 284 aa13.16□□□□□ -0.3
HLA-F-222ENST00000462777 Q8N976 141 aa13.16□□□□□ -0.3
HLA-F-222ENST00000462777 ARMS2P0C7Q2 107 aa13.15□□□□□ -0.3
HLA-F-222ENST00000462777 BAALCQ8WXS3 180 aa13.15□□□□□ -0.3
HLA-F-222ENST00000462777 MRPL18Q9H0U6 180 aaKnown RBP13.15□□□□□ -0.3
HLA-F-222ENST00000462777 RAB4BP61018 213 aa13.14□□□□□ -0.31
HLA-F-222ENST00000462777 FABP9Q0Z7S8 132 aa13.14□□□□□ -0.31
HLA-F-222ENST00000462777 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
HLA-F-222ENST00000462777 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
HLA-F-222ENST00000462777 DNAH8Q96JB1 4490 aa13.14□□□□□ -0.31
HLA-F-222ENST00000462777 GRIFINA4D1Z8 144 aa13.13□□□□□ -0.31
HLA-F-222ENST00000462777 RHODO00212 210 aa13.13□□□□□ -0.31
HLA-F-222ENST00000462777 LINC00694P0DN24 101 aa13.13□□□□□ -0.31
HLA-F-222ENST00000462777 IGKV2D-24A0A075B6R9 120 aa13.12□□□□□ -0.31
HLA-F-222ENST00000462777 APCSP02743 223 aa13.12□□□□□ -0.31
HLA-F-222ENST00000462777 CAMPP49913 170 aa13.12□□□□□ -0.31
HLA-F-222ENST00000462777 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BKO60814 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 S100A6P06703 90 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BJP06899 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 TRGC1P0CF51 173 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BOP23527 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BBP33778 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BDP58876 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BCP62807 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST2H2BEQ16778 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-222ENST00000462777 SCXQ7RTU7 201 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 C14orf178Q8N769 122 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BHQ93079 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BNQ99877 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 HIST1H2BMQ99879 126 aa13.11□□□□□ -0.31
HLA-F-222ENST00000462777 A0A087WX48 190 aa13.1□□□□□ -0.31
HLA-F-222ENST00000462777 H3BVH4 76 aa13.1□□□□□ -0.31
HLA-F-222ENST00000462777 SMIM15Q7Z3B0 74 aa13.1□□□□□ -0.31
HLA-F-222ENST00000462777 TMEM191AQ9H0A3 160 aa13.1□□□□□ -0.31
HLA-F-222ENST00000462777 JPT2Q9H910 190 aa13.1□□□□□ -0.31
HLA-F-222ENST00000462777 LINC01620Q4KN68 170 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 SERTAD4-AS1Q5TG53 156 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 NIT1Q86X76 327 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 ZFP82Q8N141 532 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 CHAC1Q9BUX1 264 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 Q9UF83 564 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 KLK12Q9UKR0 248 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 PHLDA3Q9Y5J5 127 aa13.09□□□□□ -0.31
HLA-F-222ENST00000462777 NTF3P20783 257 aa13.08□□□□□ -0.32
HLA-F-222ENST00000462777 TWIST1Q15672 202 aa13.08□□□□□ -0.32
HLA-F-222ENST00000462777 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
HLA-F-222ENST00000462777 UBE2WQ96B02 151 aa13.08□□□□□ -0.32
HLA-F-222ENST00000462777 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
HLA-F-222ENST00000462777 Q0VG73 95 aa13.07□□□□□ -0.32
HLA-F-222ENST00000462777 COA6Q5JTJ3 125 aaKnown RBP13.07□□□□□ -0.32
HLA-F-222ENST00000462777 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
HLA-F-222ENST00000462777 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
HLA-F-222ENST00000462777 OR10AG1Q8NH19 301 aa13.06□□□□□ -0.32
HLA-F-222ENST00000462777 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
HLA-F-222ENST00000462777 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
HLA-F-222ENST00000462777 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
HLA-F-222ENST00000462777 A0A087WWL8 130 aa13.04□□□□□ -0.32
HLA-F-222ENST00000462777 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
HLA-F-222ENST00000462777 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
HLA-F-222ENST00000462777 PPBPP02775 128 aa13.04□□□□□ -0.32
HLA-F-222ENST00000462777 C5orf52A6NGY3 159 aa13.03□□□□□ -0.32
HLA-F-222ENST00000462777 OXTP01178 125 aa13.03□□□□□ -0.32
HLA-F-222ENST00000462777 CIRBP-AS1Q8TBR5 109 aa13.03□□□□□ -0.32
HLA-F-222ENST00000462777 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
HLA-F-222ENST00000462777 C1orf43Q9BWL3 253 aa13.03□□□□□ -0.32
HLA-F-222ENST00000462777 M0R381 172 aa13.02□□□□□ -0.33
HLA-F-222ENST00000462777 ALKBH7Q9BT30 221 aaPredicted RBP13.02□□□□□ -0.33
HLA-F-222ENST00000462777 LAMTOR2Q9Y2Q5 125 aa13.02□□□□□ -0.33
HLA-F-222ENST00000462777 TRBV7-3A0A075B6L6 115 aa13.01□□□□□ -0.33
HLA-F-222ENST00000462777 CRPP02741 224 aa13.01□□□□□ -0.33
HLA-F-222ENST00000462777 NDUFA6P56556 154 aa13.01□□□□□ -0.33
HLA-F-222ENST00000462777 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
HLA-F-222ENST00000462777 ORMDL3Q8N138 153 aa13□□□□□ -0.33
HLA-F-222ENST00000462777 MUC21A0A0G2JKD1 596 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 MUC21A0A140T8X8 626 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 UBE2D3P61077 147 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 UBE2D2P62837 147 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 KIAA1644Q3SXP7 199 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 MRAP2Q96G30 205 aa12.99□□□□□ -0.33
HLA-F-222ENST00000462777 RAB4AP20338 218 aa12.98□□□□□ -0.33
HLA-F-222ENST00000462777 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
HLA-F-222ENST00000462777 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms