RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 CDC34P49427 236 aaPredicted RBP3.13□□□□□ -1.91
BRCA1-206ENST00000461574 SULT1A2P50226 295 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 SSTP61278 116 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 CACNG7P62955 275 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 Q6ZRP5 223 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 DERL1Q9BUN8 251 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 SMIM3Q9BZL3 60 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 PKIGQ9Y2B9 76 aa3.13□□□□□ -1.91
BRCA1-206ENST00000461574 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 LYRM1O43325 122 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 PET100P0DJ07 73 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 GZMBP10144 247 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 IL7P13232 177 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 RPS10P46783 165 aaKnown RBP3.12□□□□□ -1.91
BRCA1-206ENST00000461574 RAB4BP61018 213 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 RAB2AP61019 212 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 PRR4Q16378 134 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 HIGD2BQ4VC39 106 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 KRTAP26-1Q6PEX3 210 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 ZNF664Q8N3J9 261 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 NEXN-AS1Q8NBZ9 246 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 OR10G8Q8NGN5 311 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 ALKBH7Q9BT30 221 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-206ENST00000461574 LINC00474Q9P2X8 69 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 VAX2Q9UIW0 290 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 EPDR1Q9UM22 224 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 ARL2-SNX15V9GYD0 113 aa3.12□□□□□ -1.91
BRCA1-206ENST00000461574 A0A096LNI7 61 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 IGKV3OR2-268A0A0C4DH90 116 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 MUC21A0A0G2JKD1 596 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 TRBV6-1A0A0K0K1D8 114 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 KRBOX1C9JBD0 128 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 UBE2L6O14933 153 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 SH2D1AO60880 128 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 SIX6O95475 246 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 STAG3L2P0CL84 134 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 SMIM17P0DL12 118 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 GCHFRP30047 84 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 IL15RAQ13261 267 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 LBHQ53QV2 105 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-206ENST00000461574 DNLZQ5SXM8 178 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 NTM-AS1Q6ZSK4 140 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 Q86TA4 180 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 RBM38Q9H0Z9 239 aaKnown RBP3.11□□□□□ -1.91
BRCA1-206ENST00000461574 TMEM167BQ9NRX6 74 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 HSPB11Q9Y547 144 aa3.11□□□□□ -1.91
BRCA1-206ENST00000461574 A0A0U1RRA0 63 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 CXorf1O96002 111 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 MT-ND6P03923 174 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 RPL12P30050 165 aaKnown RBP3.1□□□□□ -1.91
BRCA1-206ENST00000461574 DEFA3P59666 94 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 UBE2G1P62253 170 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 CYCSP99999 105 aaKnown RBP3.1□□□□□ -1.91
BRCA1-206ENST00000461574 FAM162BQ5T6X4 162 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 SPANXN1Q5VSR9 72 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 PRR27Q6MZM9 219 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 AQP10Q96PS8 301 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 TMEM243Q9BU79 118 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 ZNF471Q9BX82 626 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-206ENST00000461574 PSORS1C2Q9UIG4 136 aa3.1□□□□□ -1.91
BRCA1-206ENST00000461574 PEX7O00628 323 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 MGPP08493 103 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 UBE2G2P60604 165 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 SRSF9Q13242 221 aaKnown RBP eCLIP3.09□□□□□ -1.91
BRCA1-206ENST00000461574 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 RGS21Q2M5E4 152 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 CD164L2Q6UWJ8 174 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 C15orf56Q8N910 161 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 C20orf203Q8NBC4 194 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 OR10AG1Q8NH19 301 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 PPP1R1CQ8WVI7 109 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 CARD19Q96LW7 228 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 AP1S3Q96PC3 154 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 NDUFA13Q9P0J0 144 aa3.09□□□□□ -1.91
BRCA1-206ENST00000461574 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 MUC21A0A140T8X8 626 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 A0A1B0GUV1 79 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 A0A1W2PRE2 83 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 PLA2G10O15496 165 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 MBP02144 154 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 CRIP1P50238 77 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 UBE2D1P51668 147 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 C1orf137Q5JT78 98 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 PRR26Q8N8Z3 221 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 HIST1H2BAQ96A08 127 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 FMC1Q96HJ9 113 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 SDHCQ99643 169 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-206ENST00000461574 ACTR3CQ9C0K3 210 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-206ENST00000461574 GEMIN7Q9H840 131 aaKnown RBP3.08□□□□□ -1.92
BRCA1-206ENST00000461574 ZFP30Q9Y2G7 519 aa3.08□□□□□ -1.92
BRCA1-206ENST00000461574 GVQW2A0A096LPI5 108 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-206ENST00000461574 MPC2O95563 127 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 AMTP48728 403 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 NKX2-5P52952 324 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms