RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 IGHV3-73A0A0B4J1V6 119 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 K7EQD1 137 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 DLEU1O43261 78 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 COTL1Q14019 142 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 PMVKQ15126 192 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 SLC25A34Q6PIV7 304 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 LINC00612Q8N6U2 182 aa7.89□□□□□ -1.15
NEDD9-206ENST00000461055 hDV102S1A0JD36 115 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 M0R143 59 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 COX8AP10176 69 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 MIFP14174 115 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
NEDD9-206ENST00000461055 EGFEM1PQ0D2K5 195 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 TMEM97Q5BJF2 176 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 Q6ZSN1 163 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 NEGR1Q7Z3B1 354 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 C14orf144Q96I85 54 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 ZNF479Q96JC4 524 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 PRADC1Q9BSG0 188 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 SPANXA1Q9NS26 97 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 DKK2Q9UBU2 259 aa7.88□□□□□ -1.15
NEDD9-206ENST00000461055 CHTOPQ9Y3Y2 248 aaKnown RBP7.88□□□□□ -1.15
NEDD9-206ENST00000461055 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 GAGE12BA1L429 117 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 G3V4G9 280 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 SIVA1O15304 175 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 GAGE7O76087 117 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 GAGE12FP0CL80 117 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 GAGE12GP0CL81 117 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 GAGE12IP0CL82 117 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 P0DMU3 169 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 FAM231AP0DMU4 169 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 FAM231CP0DMU5 169 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 TIMM21Q9BVV7 248 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 MRPL35Q9NZE8 188 aaKnown RBP7.87□□□□□ -1.15
NEDD9-206ENST00000461055 X6R8D5 127 aa7.87□□□□□ -1.15
NEDD9-206ENST00000461055 TRGV4A0A0C4DH28 118 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 PRSS29PA6NIE9 313 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 IGHV4-30-4P0DP06 118 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 RNF183Q96D59 192 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 GTSF1LQ9H1H1 148 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 CST9LQ9H4G1 147 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 HHLA3Q9XRX5 114 aa7.86□□□□□ -1.15
NEDD9-206ENST00000461055 H7C423 109 aa7.85□□□□□ -1.15
NEDD9-206ENST00000461055 SLC25A29Q8N8R3 303 aa7.85□□□□□ -1.15
NEDD9-206ENST00000461055 ZNRF2Q8NHG8 242 aa7.85□□□□□ -1.15
NEDD9-206ENST00000461055 VCX2Q9H322 139 aa7.85□□□□□ -1.15
NEDD9-206ENST00000461055 DNAH3Q8TD57 4116 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 UBE2D3P61077 147 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 HERVK_113P61574 105 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 UBE2D2P62837 147 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 RPL39P62891 51 aaKnown RBP7.84□□□□□ -1.15
NEDD9-206ENST00000461055 MRPS36P82909 103 aaKnown RBP7.84□□□□□ -1.15
NEDD9-206ENST00000461055 FHL2Q14192 279 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 OR11H2Q8NH07 326 aa7.84□□□□□ -1.15
NEDD9-206ENST00000461055 CSDC2Q9Y534 153 aaKnown RBP7.84□□□□□ -1.15
NEDD9-206ENST00000461055 NACAE9PAV3 2078 aa7.83□□□□□ -1.16
NEDD9-206ENST00000461055 CTAG1AP78358 180 aa7.83□□□□□ -1.16
NEDD9-206ENST00000461055 ANKRD39Q53RE8 183 aa7.83□□□□□ -1.16
NEDD9-206ENST00000461055 ZC2HC1BQ5TFG8 222 aa7.83□□□□□ -1.16
NEDD9-206ENST00000461055 STPG4Q8N801 248 aa7.83□□□□□ -1.16
NEDD9-206ENST00000461055 CHCHD7Q9BUK0 85 aa7.83□□□□□ -1.16
NEDD9-206ENST00000461055 DNAH9Q9NYC9 4486 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 EMP1P54849 157 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 DEFB135Q30KP9 77 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 PRO0255Q9UI72 69 aa7.82□□□□□ -1.16
NEDD9-206ENST00000461055 IGLV4-3A0A075B6K6 122 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 C11orf86A6NJI1 115 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 DEFB130BP0DP73 79 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 DEFB130AP0DP74 79 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 OXLD1Q5BKU9 147 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 DGAT2L7PQ6IED9 249 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 AMELXQ99217 191 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 UBE2D4Q9Y2X8 147 aa7.81□□□□□ -1.16
NEDD9-206ENST00000461055 IGHV4-28A0A0C4DH34 117 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 GAGE12JA6NER3 117 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 E9PLD3 99 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 NMUP48645 174 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 SEC11AP67812 179 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 GAGE1Q13065 139 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 GAGE4Q13068 117 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 GAGE5Q13069 117 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 GAGE13Q4V321 117 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 SH2D6Q7Z4S9 175 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 PHLDA1Q8WV24 401 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-206ENST00000461055 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 SNHG12Q9BXW3 62 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 HIGD1BQ9P298 99 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
NEDD9-206ENST00000461055 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
NEDD9-206ENST00000461055 TRBV25-1A0A075B6N4 114 aa7.79□□□□□ -1.16
NEDD9-206ENST00000461055 FGF6P10767 208 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms