RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SRD5A1P18405 259 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 SMCPP49901 116 aaPredicted RBP4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 DEFB1P60022 68 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 MRPS36P82909 103 aaKnown RBP4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF56Q15929 161 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 AMTNQ6UX39 209 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 Q8N1Y9 231 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 WFDC12Q8WWY7 111 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 DNAJC30Q96LL9 226 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 UBE2E2Q96LR5 201 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 JPT2Q9H910 190 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 YAE1D1Q9NRH1 226 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 NF1P21359 2839 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 IGLV4-3A0A075B6K6 122 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 A0A087WWL8 130 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 LOC107984156A0A0G2JMH3 177 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 TRBV30A0A0K0K1B3 111 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 A8MWV9 139 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 TIMM17BO60830 172 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 IGHV3-33P01772 117 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF688P0C7X2 276 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF22P17026 224 aaPredicted RBP4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 PSMB2P49721 201 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 TSPEAR-AS2P59090 65 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 Q6ZS46 218 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 ARL17AQ8IVW1 177 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF418Q8TF45 676 aaPredicted RBP4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 TMEM263Q8WUH6 116 aaKnown RBP4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 SPANXDQ9BXN6 97 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 GTSF1LQ9H1H1 148 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 PPDPFQ9H3Y8 114 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 SPANXA1Q9NS26 97 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 SPANXCQ9NY87 97 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 CR1P17927 2039 aa4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 SONP18583 2426 aaKnown RBP4.51□□□□□ -1.69
UBQLN4-202ENST00000459954 JMJD1CQ15652 2540 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 IGKV3-7A0A075B6H7 116 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 A0A0J9YXY3 114 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 TINCRA0A1B0GVN0 87 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 SPRY2O43597 315 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 TCL1BO95988 128 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 FSHBP01225 129 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 IFITM1P13164 125 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 KRTAP1-1Q07627 177 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 SMAGPQ0VAQ4 97 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 TMEM86BQ8N661 226 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 TIMM21Q9BVV7 248 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 ERG28Q9UKR5 140 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 SELENOKQ9Y6D0 94 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 C2CD3Q4AC94 2353 aa4.5□□□□□ -1.69
UBQLN4-202ENST00000459954 SORL1Q92673 2214 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF469Q96JG9 3925 aaPredicted RBP4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 AVPP01185 164 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 SCGB1C2P0DMR2 95 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 TIRAPP58753 221 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 ZNF415Q09FC8 603 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 DEFB112Q30KQ8 113 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 BEAN1Q3B7T3 259 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 FAM74A4Q5TZK3 123 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 Q6YL49 198 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 Q8N2B8 174 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 VPREB3Q9UKI3 123 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 TNFRSF18Q9Y5U5 241 aa4.49□□□□□ -1.69
UBQLN4-202ENST00000459954 ATRQ13535 2644 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 ZFHX3Q15911 3703 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 A0A0J9YXV3 536 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 F8WDY8 70 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 H3BMM0 161 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 WIPF1O43516 503 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 IGHV3-30-3P0DP02 117 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 RPL13AP40429 203 aaKnown RBP4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 INSL3P51460 131 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 ATXN8Q156A1 80 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 SPINK13Q1W4C9 94 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 MUSTN1Q8IVN3 82 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 MAPK1IP1LQ8NDC0 245 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 COPS9Q8WXC6 57 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 CITED1Q99966 193 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 PEMTQ9UBM1 199 aa4.48□□□□□ -1.69
UBQLN4-202ENST00000459954 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 TRAV25A0A0B4J276 109 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 INAFM1C9JVW0 142 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 RS1O15537 224 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 SLC25A20O43772 301 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 IGHV4-59P01825 116 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 COX6CP09669 75 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 EDN2P20800 178 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 HOXD3P31249 432 aaPredicted RBP4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 EMP1P54849 157 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 SYNJ2BPP57105 145 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 CKS1BP61024 79 aa4.47□□□□□ -1.69
UBQLN4-202ENST00000459954 MRPL23Q16540 153 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms