RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 BPESC1Q9GZL8 116 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 ARFGEF3Q5TH69 2177 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 MSMBP08118 114 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 GNLYP22749 145 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 COX7BP24311 80 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 ZFAND3Q9H8U3 227 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 NACAE9PAV3 2078 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 ZNF318Q5VUA4 2279 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 DOCK7Q96N67 2140 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 TSHBP01222 138 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 ANGP03950 147 aaKnown RBP3.75□□□□□ -1.81
PCDH9-203ENST00000456367 LINC01356Q8N9X3 169 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 SMAD5-AS1Q9Y6J3 95 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 TANC2Q9HCD6 1990 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 IGLV4-69A0A075B6H9 119 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 NCR3O14931 201 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 DEFB130BP0DP73 79 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 DEFB130AP0DP74 79 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 SMCPP49901 116 aaPredicted RBP3.75□□□□□ -1.81
PCDH9-203ENST00000456367 CRIP2P52943 208 aaPredicted RBP3.75□□□□□ -1.81
PCDH9-203ENST00000456367 CEP290O15078 2479 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 ODF3BA8MYP8 253 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 DPH3Q96FX2 82 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 MALRD1Q5VYJ5 2156 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 RPL35AP18077 110 aaKnown RBP3.74□□□□□ -1.81
PCDH9-203ENST00000456367 KIR2DL5BQ8NHK3 375 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 NOTCH4Q99466 2003 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 DOCK10Q96BY6 2186 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 RMI2Q96E14 147 aa3.74□□□□□ -1.81
PCDH9-203ENST00000456367 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 CCDC140Q96MF4 163 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 KLK5Q9Y337 293 aaPredicted RBP3.73□□□□□ -1.81
PCDH9-203ENST00000456367 ETDCA0A1B0GVM5 59 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 PCNX2A6NKB5 2137 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 LY6LH3BQJ8 138 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 UBE2AP49459 152 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 RNASE3P12724 160 aaKnown RBP3.73□□□□□ -1.81
PCDH9-203ENST00000456367 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 C9orf85Q96MD7 179 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 LINC00467Q9BRT7 94 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 APC2O95996 2303 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 KLLNB2CW77 178 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 NOP10Q9NPE3 64 aaKnown RBP3.73□□□□□ -1.81
PCDH9-203ENST00000456367 C11orf21Q9P2W6 132 aa3.73□□□□□ -1.81
PCDH9-203ENST00000456367 DEFB121Q5J5C9 76 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 ZGRF1Q86YA3 2104 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 SPTA1P02549 2419 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 MSMPQ1L6U9 139 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 HCFC1P51610 2035 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 WISP2O76076 250 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 LY6HO94772 140 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 CFHR3Q02985 330 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 MRGPRG-AS1Q2M3A8 158 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 CEMP1Q6PRD7 247 aaPredicted RBP3.72□□□□□ -1.81
PCDH9-203ENST00000456367 SMIM11BQ8TCY0 68 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 UBE2D4Q9Y2X8 147 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 SNURFQ9Y675 71 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 EML5Q05BV3 1969 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 TNCP24821 2201 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 K7EQG2 157 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 GAS8-AS1O95177 125 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 IGF1P05019 195 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 COX17Q14061 63 aa3.72□□□□□ -1.81
PCDH9-203ENST00000456367 PCDH15Q96QU1 1955 aa3.71□□□□□ -1.81
PCDH9-203ENST00000456367 APOC4P55056 127 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 AMELXQ99217 191 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 C2orf16Q68DN1 1984 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 SPAG11BQ08648 103 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.71□□□□□ -1.82
PCDH9-203ENST00000456367 CAMK2N2Q96S95 79 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 MED13Q9UHV7 2174 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 CRYGDP07320 174 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 TSPEAR-AS2P59090 65 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 POM121L12Q8N7R1 296 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 ROS1P08922 2347 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 AKAP6Q13023 2319 aa3.71□□□□□ -1.82
PCDH9-203ENST00000456367 CHKB-CPT1BH3BT56 60 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 UNQ9165/PRO28630Q6UXU0 137 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 PRYO14603 147 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 SLPIP03973 132 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 SERTAD4-AS1Q5TG53 156 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 NTM-AS1Q6ZSK4 140 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 SPTBN1Q01082 2364 aaKnown RBP3.7□□□□□ -1.82
PCDH9-203ENST00000456367 GYPEP15421 78 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 CADP27708 2225 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 DOPEY2Q9Y3R5 2298 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 TRBV7-6A0A0J9YX20 115 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 DEFB105AQ8NG35 78 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
PCDH9-203ENST00000456367 POLEQ07864 2286 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 ZFHX3Q15911 3703 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 DSCAML1Q8TD84 2053 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 FREM1Q5H8C1 2179 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 TRBV6-4A0A1B0GX49 114 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 CCL24O00175 119 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 CXCL6P80162 114 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 ESRGQ1W209 222 aa3.69□□□□□ -1.82
PCDH9-203ENST00000456367 Q8N6K4 173 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms