RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 SPINK13Q1W4C9 94 aa4.4□□□□□ -1.71
MSH6-205ENST00000454137 C3orf56Q8N813 242 aa4.4□□□□□ -1.71
MSH6-205ENST00000454137 NEXN-AS1Q8NBZ9 246 aa4.4□□□□□ -1.71
MSH6-205ENST00000454137 OR11H2Q8NH07 326 aa4.4□□□□□ -1.71
MSH6-205ENST00000454137 PHLDA1Q8WV24 401 aaPredicted RBP4.4□□□□□ -1.71
MSH6-205ENST00000454137 RAB37Q96AX2 223 aa4.4□□□□□ -1.71
MSH6-205ENST00000454137 MUC4Q99102 2169 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 FBN1P35555 2871 aaKnown RBP4.39□□□□□ -1.71
MSH6-205ENST00000454137 TRBV7-3A0A075B6L6 115 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 MYMXA0A1B0GTQ4 84 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 E9PLD3 99 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 K7ERJ3 54 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 RNASE3P12724 160 aaKnown RBP4.39□□□□□ -1.71
MSH6-205ENST00000454137 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 C2orf66Q6UXQ4 117 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 NEGR1Q7Z3B1 354 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
MSH6-205ENST00000454137 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 RPL39LQ96EH5 51 aaKnown RBP4.39□□□□□ -1.71
MSH6-205ENST00000454137 C9orf85Q96MD7 179 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 SPXQ9BT56 116 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 TTTY13Q9BZ97 58 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 NHP2Q9NX24 153 aaKnown RBP4.39□□□□□ -1.71
MSH6-205ENST00000454137 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
MSH6-205ENST00000454137 IGHV3-16A0A0C4DH30 117 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 TRBV6-5A0A0K0K1A5 114 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 A0A1B0GWB2 263 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 A8MZ25 164 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 SPRY2O43597 315 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 CD7P09564 240 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 RBMY1A1P0DJD3 496 aaKnown RBP4.38□□□□□ -1.71
MSH6-205ENST00000454137 RBMY1CP0DJD4 496 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 LINC00315P59091 139 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 HERVK_113P61574 105 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 EGFEM1PQ0D2K5 195 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 RBMY1FQ15415 496 aaKnown RBP4.38□□□□□ -1.71
MSH6-205ENST00000454137 MAPKAPK5-AS1Q8N8E1 139 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 SYT8Q8NBV8 401 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 KIR2DL5BQ8NHK3 375 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 TMEM141Q96I45 108 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 NAA38Q9BRA0 125 aaKnown RBP4.38□□□□□ -1.71
MSH6-205ENST00000454137 CSTL1Q9H114 145 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 KIF25-AS1Q9Y6Z4 181 aa4.38□□□□□ -1.71
MSH6-205ENST00000454137 STAB1Q9NY15 2570 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 IGLL5B9A064 214 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 G3V4G9 280 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 VCYO14598 125 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 CIDEAO60543 219 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 GIG44P09565 113 aaPredicted RBP4.37□□□□□ -1.71
MSH6-205ENST00000454137 RHOHQ15669 191 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 RRN3P1Q2M238 152 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 C12orf74Q32Q52 190 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 SUMO4Q6EEV6 95 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 CSNK1G2-AS1Q8NCQ2 148 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 PRADC1Q9BSG0 188 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 EDA2RQ9HAV5 297 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 MDFICQ9P1T7 246 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 COL6A5A8TX70 2615 aa4.37□□□□□ -1.71
MSH6-205ENST00000454137 SMIM9A6NGZ8 99 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 TRIAP1O43715 76 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 POLR2KP53803 58 aaKnown RBP4.36□□□□□ -1.71
MSH6-205ENST00000454137 ZNF415Q09FC8 603 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 DAZ2Q13117 558 aaKnown RBP4.36□□□□□ -1.71
MSH6-205ENST00000454137 PMVKQ15126 192 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 ZFP2Q6ZN57 461 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 C1orf158Q8N1D5 194 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 C11orf72Q8NBR9 251 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 SPATA3Q8NHX4 192 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 TMEM263Q8WUH6 116 aaKnown RBP4.36□□□□□ -1.71
MSH6-205ENST00000454137 TP53TG1Q9Y2A0 90 aa4.36□□□□□ -1.71
MSH6-205ENST00000454137 NOTCH3Q9UM47 2321 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 IGLV4-69A0A075B6H9 119 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 TRBV27A0A0K0K1C4 114 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 GAGE12HA6NDE8 117 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 IGIPA6NJ69 53 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 ZNF815PA8K554 130 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 A8MWV9 139 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 F8W1H4 67 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 J3QR89 54 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 M0R2P5 195 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 APOC4P55056 127 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 LYRM7Q5U5X0 104 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 C16orf74Q96GX8 76 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 LINC01587Q99440 93 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 OVOL2Q9BRP0 275 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 WFDC10AQ9H1F0 79 aa4.35□□□□□ -1.71
MSH6-205ENST00000454137 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 SDHAF1A6NFY7 115 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 C11orf86A6NJI1 115 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 F5H697 171 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 RHODO00212 210 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 TSHBP01222 138 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 CRYGDP07320 174 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
MSH6-205ENST00000454137 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms