RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
RFTN1-207ENST00000453536 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
RFTN1-207ENST00000453536 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
RFTN1-207ENST00000453536 F2Z2F3 143 aa9.09□□□□□ -0.95
RFTN1-207ENST00000453536 GATCO43716 136 aaKnown RBP9.09□□□□□ -0.95
RFTN1-207ENST00000453536 TRGC1P0CF51 173 aa9.09□□□□□ -0.95
RFTN1-207ENST00000453536 TMEM243Q9BU79 118 aa9.09□□□□□ -0.95
RFTN1-207ENST00000453536 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
RFTN1-207ENST00000453536 XKRY2A2RUG3 117 aa9.08□□□□□ -0.96
RFTN1-207ENST00000453536 C9JQL5 133 aa9.08□□□□□ -0.96
RFTN1-207ENST00000453536 SLPIP03973 132 aa9.08□□□□□ -0.96
RFTN1-207ENST00000453536 SRSF3P84103 164 aaKnown RBP9.08□□□□□ -0.96
RFTN1-207ENST00000453536 MIAQ16674 131 aa9.08□□□□□ -0.96
RFTN1-207ENST00000453536 H7C1H1 209 aa9.07□□□□□ -0.96
RFTN1-207ENST00000453536 SRP19P09132 144 aaKnown RBP9.07□□□□□ -0.96
RFTN1-207ENST00000453536 RPS10P46783 165 aaKnown RBP9.07□□□□□ -0.96
RFTN1-207ENST00000453536 AMTP48728 403 aa9.07□□□□□ -0.96
RFTN1-207ENST00000453536 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
RFTN1-207ENST00000453536 BLOC1S1P78537 153 aa9.07□□□□□ -0.96
RFTN1-207ENST00000453536 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
RFTN1-207ENST00000453536 TMEM250H0YL14 139 aa9.06□□□□□ -0.96
RFTN1-207ENST00000453536 SMKR1H3BMG3 65 aa9.06□□□□□ -0.96
RFTN1-207ENST00000453536 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
RFTN1-207ENST00000453536 SMIM7Q9BQ49 75 aa9.06□□□□□ -0.96
RFTN1-207ENST00000453536 EIF5A2Q9GZV4 153 aaKnown RBP9.06□□□□□ -0.96
RFTN1-207ENST00000453536 CHTF8P0CG12 524 aa9.05□□□□□ -0.96
RFTN1-207ENST00000453536 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
RFTN1-207ENST00000453536 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.05□□□□□ -0.96
RFTN1-207ENST00000453536 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
RFTN1-207ENST00000453536 FAM210AQ96ND0 272 aa9.05□□□□□ -0.96
RFTN1-207ENST00000453536 BIN3Q9NQY0 253 aa9.05□□□□□ -0.96
RFTN1-207ENST00000453536 FAM231BA6NCW3 169 aa9.04□□□□□ -0.96
RFTN1-207ENST00000453536 NCR2O95944 276 aa9.04□□□□□ -0.96
RFTN1-207ENST00000453536 TAGLN2P37802 199 aaKnown RBP9.04□□□□□ -0.96
RFTN1-207ENST00000453536 COTL1Q14019 142 aa9.04□□□□□ -0.96
RFTN1-207ENST00000453536 WDR73Q6P4I2 378 aa9.04□□□□□ -0.96
RFTN1-207ENST00000453536 FAM231DQ6ZW35 169 aa9.04□□□□□ -0.96
RFTN1-207ENST00000453536 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
RFTN1-207ENST00000453536 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
RFTN1-207ENST00000453536 TMEM242Q9NWH2 141 aa9.03□□□□□ -0.96
RFTN1-207ENST00000453536 A0A1B0GUV1 79 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 hDV102S1A0JD36 115 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 GAGE12HA6NDE8 117 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 ZNF727A8MUV8 499 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 HIGD1CA8MV81 97 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 UBE2L6O14933 153 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 AMN1Q8IY45 258 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 V9GYV3 84 aa9.02□□□□□ -0.97
RFTN1-207ENST00000453536 TSHBP01222 138 aa9.01□□□□□ -0.97
RFTN1-207ENST00000453536 PKIAP61925 76 aa9.01□□□□□ -0.97
RFTN1-207ENST00000453536 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
RFTN1-207ENST00000453536 SDIM1Q6ZPB5 146 aa9.01□□□□□ -0.97
RFTN1-207ENST00000453536 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
RFTN1-207ENST00000453536 A8MWL6 223 aa9□□□□□ -0.97
RFTN1-207ENST00000453536 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
RFTN1-207ENST00000453536 FGF6P10767 208 aa9□□□□□ -0.97
RFTN1-207ENST00000453536 RPL23P62829 140 aaKnown RBP9□□□□□ -0.97
RFTN1-207ENST00000453536 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
RFTN1-207ENST00000453536 TSKUQ8WUA8 353 aa9□□□□□ -0.97
RFTN1-207ENST00000453536 LINC00526Q96FQ7 95 aa9□□□□□ -0.97
RFTN1-207ENST00000453536 APCSP02743 223 aa8.99□□□□□ -0.97
RFTN1-207ENST00000453536 RAB4AP20338 218 aa8.99□□□□□ -0.97
RFTN1-207ENST00000453536 NUP35Q8NFH5 326 aa8.99□□□□□ -0.97
RFTN1-207ENST00000453536 ISOC2Q96AB3 205 aa8.99□□□□□ -0.97
RFTN1-207ENST00000453536 RNASE13Q5GAN3 156 aaKnown RBP8.98□□□□□ -0.97
RFTN1-207ENST00000453536 CT83Q5H943 113 aa8.98□□□□□ -0.97
RFTN1-207ENST00000453536 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
RFTN1-207ENST00000453536 OSTCQ9NRP0 149 aa8.98□□□□□ -0.97
RFTN1-207ENST00000453536 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
RFTN1-207ENST00000453536 A0A1B0GUT8 65 aa8.97□□□□□ -0.97
RFTN1-207ENST00000453536 ADIRFQ15847 76 aa8.97□□□□□ -0.97
RFTN1-207ENST00000453536 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
RFTN1-207ENST00000453536 TRAV8-4A0A0B4J246 113 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 TRBV6-5A0A0K0K1A5 114 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 J3QL48 77 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 ESDP10768 282 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 PMCHP20382 165 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 DGAT2L7PQ6IED9 249 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 SMIM15Q7Z3B0 74 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 NRACQ8N912 160 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 TMEM191AQ9H0A3 160 aa8.96□□□□□ -0.98
RFTN1-207ENST00000453536 I3L3M4 83 aa8.95□□□□□ -0.98
RFTN1-207ENST00000453536 XCL1P47992 114 aa8.95□□□□□ -0.98
RFTN1-207ENST00000453536 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
RFTN1-207ENST00000453536 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
RFTN1-207ENST00000453536 CNBPP62633 177 aaKnown RBP8.95□□□□□ -0.98
RFTN1-207ENST00000453536 FOXI1Q12951 378 aa8.95□□□□□ -0.98
RFTN1-207ENST00000453536 ST20Q9HBF5 79 aa8.95□□□□□ -0.98
RFTN1-207ENST00000453536 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
RFTN1-207ENST00000453536 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
RFTN1-207ENST00000453536 TNXBP22105 4242 aa8.94□□□□□ -0.98
RFTN1-207ENST00000453536 A0A087WYN8 130 aa8.93□□□□□ -0.98
RFTN1-207ENST00000453536 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
RFTN1-207ENST00000453536 CCL25O15444 150 aa8.93□□□□□ -0.98
RFTN1-207ENST00000453536 CAMPP49913 170 aa8.93□□□□□ -0.98
RFTN1-207ENST00000453536 COX6A2Q02221 97 aa8.93□□□□□ -0.98
RFTN1-207ENST00000453536 CIRBPQ14011 172 aaKnown RBP8.93□□□□□ -0.98
RFTN1-207ENST00000453536 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
RFTN1-207ENST00000453536 TEX261Q6UWH6 196 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms